RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 LRTM2Q8N967 370 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 SIDT2Q8NBJ9 832 aaKnown RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 CCDC148Q8NFR7 591 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 OR13C5Q8NGS8 318 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 OR1L3Q8NH93 324 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 CD99L2Q8TCZ2 262 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 HCAR2Q8TDS4 363 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 CCDC12Q8WUD4 166 aaPredicted RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 APOBEC4Q8WW27 367 aaKnown RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 RFT1Q96AA3 541 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 NXPE2Q96DL1 559 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 OMA1Q96E52 524 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 SENP5Q96HI0 755 aaPredicted RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 C10orf90Q96M02 699 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 LLPHQ9BRT6 129 aaKnown RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 PI4K2AQ9BTU6 479 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 SLC39A8Q9C0K1 460 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 SHARPINQ9H0F6 387 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 TRPV6Q9H1D0 765 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 PORCNQ9H237 461 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 ZDHHC6Q9H6R6 413 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 UBE2TQ9NPD8 197 aaPredicted RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 PHPT1Q9NRX4 125 aaPredicted RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 HOMER3Q9NSC5 361 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 DNAJC11Q9NVH1 559 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 BARHL2Q9NY43 387 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.61□□□□□ -1.99
RPA1-204ENST00000571725 TRIM10Q9UDY6 481 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 UBQLN2Q9UHD9 624 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 LNPEPQ9UIQ6 1025 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 ERRFI1Q9UJM3 462 aaPredicted RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 NAP1L2Q9ULW6 460 aaPredicted RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 SATB2Q9UPW6 733 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 FOXA2Q9Y261 457 aaPredicted RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 WDR37Q9Y2I8 494 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 MRPL11Q9Y3B7 192 aaKnown RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 KIF3AQ9Y496 699 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 BAZ2BQ9UIF8 2168 aaKnown RBP2.61□□□□□ -1.99
RPA1-204ENST00000571725 DOCK3Q8IZD9 2030 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 BRCA2P51587 3418 aa2.61□□□□□ -1.99
RPA1-204ENST00000571725 LCTP09848 1927 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 ZNFX1Q9P2E3 1918 aaKnown RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 LRRC37A2A6NM11 1700 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 SMCHD1A6NHR9 2005 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 A0A0A6YYC8 382 aaPredicted RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 TRBV4-1A0A0J9YWV2 114 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 hCG_38984A0A1B0GV85 526 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 CCDC162PA2VCL2 907 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 ANTXRLA6NF34 631 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 ARHGAP42A6NI28 874 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 ASB14A6NK59 587 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 SNURFLB1AK76 121 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 HHLA1C9JL84 531 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 I3L1I5 382 aaPredicted RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 CHUKO15111 745 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 KIF5CO60282 957 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 GMNNO75496 209 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 MTRF1O75570 445 aaKnown RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 ZNF432O94892 652 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 NXPH2O95156 264 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 SEC24AO95486 1093 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 MT-ND2P03891 347 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 GPIP06744 558 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 SERPINF2P08697 491 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 POLR2MP0CAP2 368 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 RNF224P0DH78 156 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 DLATP10515 647 aaKnown RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 AREGP15514 252 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 CEBPBP17676 345 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 GAP43P17677 238 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 GIFP27352 417 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 MAPK3P27361 379 aaPredicted RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 CALML3P27482 149 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 GNA11P29992 359 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 MAGEB1P43366 347 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 NSFP46459 744 aaKnown RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 OR3A2P47893 321 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 NAPAP54920 295 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 UCP2P55851 309 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 ABCE1P61221 599 aaKnown RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 RPS6P62753 249 aaKnown RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 CYCSP99999 105 aaKnown RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 CDKL1Q00532 357 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 GUCY2DQ02846 1103 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 SRSF9Q13242 221 aaKnown RBP eCLIP2.6□□□□□ -1.99
RPA1-204ENST00000571725 CDH18Q13634 790 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 HNRNPDQ14103 355 aaKnown RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 GAMTQ14353 236 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 TAB1Q15750 504 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 STX1AQ16623 288 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 USH1GQ495M9 461 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 ZNF876PQ49A33 203 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 XKR3Q5GH77 459 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 FAM76BQ5HYJ3 339 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 C9orf50Q5SZB4 431 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 ZNF776Q68DI1 518 aaPredicted RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 ZNF770Q6IQ21 691 aaPredicted RBP2.6□□□□□ -1.99
RPA1-204ENST00000571725 RAB12Q6IQ22 244 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 GALNT17Q6IS24 598 aa2.6□□□□□ -1.99
RPA1-204ENST00000571725 TRIM65Q6PJ69 517 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms