RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CFAP77Q6ZQR2 320 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ERN2Q76MJ5 926 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 BZW1Q7L1Q6 419 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 PIWIL4Q7Z3Z4 852 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 SYCE1Q8N0S2 351 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 NDUFAF2Q8N183 169 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 PYROXD2Q8N2H3 581 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 DEFB119Q8N690 84 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 SLC5A8Q8N695 610 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 TC2NQ8N9U0 490 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 RBM15BQ8NDT2 890 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 OR2AP1Q8NGE2 309 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 OR10V1Q8NGI7 309 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 OR52K2Q8NGK3 314 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 OR2T34Q8NGX1 318 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 RAB7BQ96AH8 199 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ZNF641Q96N77 438 aaPredicted RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 ZNF599Q96NL3 588 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 OR2A14Q96R47 310 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 F2RL3Q96RI0 385 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 PSMB7Q99436 277 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 GFI1Q99684 422 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 BAG1Q99933 345 aaPredicted RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 FERMT1Q9BQL6 677 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 SNRNP25Q9BV90 132 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 EDEM2Q9BV94 578 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 NEUROG2Q9H2A3 272 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 TMEM9BQ9NQ34 198 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 RCC2Q9P258 522 aaKnown RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 AASSQ9UDR5 926 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 MFHAS1Q9Y4C4 1052 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 ZFHX2Q9C0A1 2572 aaPredicted RBP3.7□□□□□ -1.82
NUP88-202ENST00000570937 CFAP54Q96N23 3096 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 USP34Q70CQ2 3546 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 KIAA1549LQ6ZVL6 1849 aa3.7□□□□□ -1.82
NUP88-202ENST00000570937 WDR87Q6ZQQ6 2873 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 LNP1A1A4G5 178 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 C15orf62A8K5M9 175 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TMEM110-MUSTN1A8MSY1 372 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ZNF487B1APH4 448 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 PRAMEF26H0Y7S4 382 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 K7ERQ8 282 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 SLC30A4O14863 429 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 VILLO15195 856 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 YKT6O15498 198 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 OGG1O15527 345 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 PRAMEF11O60813 436 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TMCC2O75069 709 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ZNF821O75541 412 aaPredicted RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 ZNF189O75820 626 aaPredicted RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 ZMPSTE24O75844 475 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TUBBP07437 444 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ZNF883P0CG24 379 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ERCC2P18074 760 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ANXA7P20073 488 aaKnown RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 CA4P22748 312 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 CCNCP24863 283 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 HRH2P25021 359 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 AKT2P31751 481 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TNNT3P45378 269 aaPredicted RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 ARRB1P49407 418 aaPredicted RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 NUMBP49757 651 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 GPR143P51810 404 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 CCNHP51946 323 aaPredicted RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 HADHBP55084 474 aaKnown RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 AP1S1P61966 158 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TUBB4BP68371 445 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 IRX4P78413 519 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 IL10RBQ08334 325 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 SPOCK1Q08629 439 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ELP6Q0PNE2 266 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 DPYSQ14117 519 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TFDP2Q14188 446 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ZNF235Q14590 738 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 PDK1Q15118 436 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 SF3A2Q15428 464 aaKnown RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 CA9Q16790 459 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ANKRD20A8PQ5CZ79 823 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 WDR38Q5JTN6 314 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 CEP85LQ5SZL2 805 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 MARC1Q5VT66 337 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 PACS1Q6VY07 963 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 DGLUCYQ7Z3D6 616 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 KIAA1328Q86T90 577 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 CCDC190Q86UF4 302 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 IQCHQ86VS3 1027 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TRIM69Q86WT6 500 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 VSIG1Q86XK7 387 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 DNAAF5Q86Y56 855 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 RCOR2Q8IZ40 523 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ATPAF2Q8N5M1 289 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 WDSUB1Q8N9V3 476 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 KIAA1524Q8TCG1 905 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 BIRC7Q96CA5 298 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 CELF6Q96J87 481 aaKnown RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 SERAC1Q96JX3 654 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 CSPG4P5Q96PW8 444 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 PSKH2Q96QS6 385 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms