RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 CEP76Q8TAP6 659 aa10.27□□□□□ -0.77
PDXDC1-216ENST00000569715 SFXN5Q8TD22 340 aa10.27□□□□□ -0.77
PDXDC1-216ENST00000569715 SLC41A2Q96JW4 573 aa10.27□□□□□ -0.77
PDXDC1-216ENST00000569715 RSPO3Q9BXY4 272 aaPredicted RBP10.27□□□□□ -0.77
PDXDC1-216ENST00000569715 TRPC4Q9UBN4 977 aa10.27□□□□□ -0.77
PDXDC1-216ENST00000569715 MAGED1Q9Y5V3 778 aaPredicted RBP10.27□□□□□ -0.77
PDXDC1-216ENST00000569715 SPACA6W5XKT8 324 aa10.27□□□□□ -0.77
PDXDC1-216ENST00000569715 NINQ8N4C6 2090 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 C7orf72A4D263 438 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 TGFBR3LH3BV60 316 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 hCG_2039718K7EN88 272 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 ACOX3O15254 700 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 DIRAS1O95057 198 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 PCBP3P57721 371 aaKnown RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 VLDLRP98155 873 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 PRSS42Q7Z5A4 293 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 D2HGDHQ8N465 521 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 ANKRD9Q96BM1 317 aaPredicted RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 TMEM19Q96HH6 336 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 NPLQ9BXD5 320 aaPredicted RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 MAGIXQ9H6Y5 334 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 SYNDIG1Q9H7V2 258 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 SEMA5BQ9P283 1151 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 KCNE3Q9Y6H6 103 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 MAU2Q9Y6X3 613 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 CFAP54Q96N23 3096 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 EME2A4GXA9 379 aaPredicted RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 FITM1A5D6W6 292 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 OR2B3O76000 313 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 NSA2O95478 260 aaKnown RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 RPLP0P05388 317 aaKnown RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 FHP07954 510 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 TFPTP0C1Z6 253 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 MATN1P21941 496 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 FUT5Q11128 374 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 SYPL1Q16563 259 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 NDUFA9Q16795 377 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 TBPL2Q6SJ96 375 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 FAM181AQ8N9Y4 354 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 RCBTB1Q8NDN9 531 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 CATSPER1Q8NEC5 780 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 NUP43Q8NFH3 380 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 MMABQ96EY8 250 aaPredicted RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 GIMAP5Q96F15 307 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 ARRDC1-AS1Q9H2J1 176 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 A4GALTQ9NPC4 353 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 VNN3Q9NY84 501 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 RPS6KA6Q9UK32 745 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 R4GN57 208 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 M0QX08 132 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 EMC8O43402 210 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 CER1O95813 267 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 CST1P01037 141 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 PORP16435 677 aaPredicted RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 MPLP40238 635 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 MAGEA2P43356 314 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 FAM53BQ14153 422 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 MYBPC3Q14896 1274 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 INAVAQ3KP66 663 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 TCTE1Q5JU00 501 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 DGAT2L6Q6ZPD8 337 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 ZBTB49Q6ZSB9 765 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 ZDHHC21Q8IVQ6 265 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 SMYD1Q8NB12 490 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 XAGE5Q8WWM1 108 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 TMBIM1Q969X1 311 aa10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 DHCR7Q9UBM7 475 aaKnown RBP10.26□□□□□ -0.77
PDXDC1-216ENST00000569715 YKT6O15498 198 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 HYAL3O43820 417 aaPredicted RBP10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 JRKO75564 520 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 PRSS23O95084 383 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 GPR75O95800 540 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 ZNF23P17027 643 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 NELFEP18615 380 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 KCNJ10P78508 379 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 TRMT12Q53H54 448 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 FKBP9P1Q75LS8 142 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 HS3ST5Q8IZT8 346 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 OR56A1Q8NGH5 318 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 RUBCNLQ9H714 662 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 RAB23Q9ULC3 237 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 ANGPT4Q9Y264 503 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 EIF4E1BA6NMX2 242 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 PCDHGA12O60330 932 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 DEAF1O75398 565 aaPredicted RBP10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 PNLIPP16233 465 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 GRM7Q14831 915 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 ZNF628Q5EBL2 1059 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 REEP3Q6NUK4 255 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 TTLL10Q6ZVT0 673 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 CCDC80Q76M96 950 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 TMEM179BQ7Z7N9 219 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 HMGN2P46Q86SG4 172 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 CARFQ8N187 725 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 ZNF768Q9H5H4 540 aaKnown RBP10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 PRDM9Q9NQV7 894 aa10.25□□□□□ -0.77
PDXDC1-216ENST00000569715 CUTCQ9NTM9 273 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms