RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 RPS8P62241 208 aaKnown RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 GNB2P62879 340 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 CNTN1Q12860 1018 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 WDR43Q15061 677 aaKnown RBP eCLIP1.29□□□□□ -2.2
SMG1-212ENST00000566328 RALBP1Q15311 655 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 TGIF1Q15583 401 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 MAPK11Q15759 364 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 SLC10A5Q5PT55 438 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 ZNF776Q68DI1 518 aaPredicted RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 CAMKMTQ7Z624 323 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 TLK2Q86UE8 772 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 PI4KAP1Q8N8J0 262 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 LINC01555Q8NAE3 123 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 CAMKVQ8NCB2 501 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 SRSF12Q8WXF0 261 aaKnown RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 LRRC3BQ96PB8 259 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 OR5M11Q96RB7 305 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 UTP14AQ9BVJ6 771 aaKnown RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 CCDC106Q9BWC9 280 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 TEX13AQ9BXU3 409 aaPredicted RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 NACAP1Q9BZK3 213 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 C10orf88Q9H8K7 445 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 IMPAD1Q9NX62 359 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 MAP3K15Q6ZN16 1313 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 CLSPNQ9HAW4 1339 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 RTL1A6NKG5 1358 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 KDRP35968 1356 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 CEMIPQ8WUJ3 1361 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 ABCC12Q96J65 1359 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 MAP3K5Q99683 1374 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 PXDNLA1KZ92 1463 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 CICQ96RK0 1608 aaPredicted RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 COL4A1P02462 1669 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 NHSQ6T4R5 1651 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 SCN11AQ9UI33 1791 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 NUP98P52948 1817 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 VIRMAQ69YN4 1812 aaKnown RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 KIF20BQ96Q89 1820 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 C5orf42Q9H799 3197 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 DLG5Q8TDM6 1919 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 CDH23Q9H251 3354 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 TCRBV21S2A2A0A5A6 115 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 TMEM150CB9EJG8 249 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 E5RGE8 158 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 PPIP5K2O43314 1243 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 EPB41L2O43491 1005 aaKnown RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 HTATSF1O43719 755 aaKnown RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 BBOX1O75936 387 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 CELF2O95319 508 aaKnown RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 ABCB1P08183 1280 aaPredicted RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 CYP11B2P19099 503 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 CAPN3P20807 821 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 EPHX2P34913 555 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 GYG1P46976 350 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 PPOXP50336 477 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 RIPPLY3P57055 190 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 UBASH3AP57075 661 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 TIMM10P62072 90 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 ZNF33BQ06732 778 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 IL10RBQ08334 325 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 DEFB115Q30KQ5 88 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 TWISTNBQ3B726 338 aaPredicted RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 ZNF542PQ5EBM4 170 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 KRT39Q6A163 491 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 CLEC4GQ6UXB4 293 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 SCARA5Q6ZMJ2 495 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 GCNT7Q6ZNI0 430 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 PPP1R42Q7Z4L9 355 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 GPR141Q7Z602 305 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 CENPVQ7Z7K6 275 aaPredicted RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 CCDC71Q8IV32 467 aaPredicted RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 CEND1Q8N111 149 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 ELMOD1Q8N336 334 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 P2RX5Q93086 422 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 NTNG2Q96CW9 530 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 CASD1Q96PB1 797 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 ALKBH7Q9BT30 221 aaPredicted RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 GPR88Q9GZN0 384 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 DPEP2Q9H4A9 486 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 MRGBPQ9NV56 204 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 CPSF2Q9P2I0 782 aaKnown RBP1.28□□□□□ -2.2
SMG1-212ENST00000566328 NCKAP1Q9Y2A7 1128 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 NSG2Q9Y328 171 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 ATP6V0A2Q9Y487 856 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 ABCC4O15439 1325 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 MAPK8IP3Q9UPT6 1336 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 KIF24Q5T7B8 1368 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 NCAPD2Q15021 1401 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 ABCC6O95255 1503 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 PAPPAQ13219 1627 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 C5P01031 1676 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 COL4A5P29400 1685 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 WNK3Q9BYP7 1800 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 ANKRD31Q8N7Z5 1873 aa1.28□□□□□ -2.2
SMG1-212ENST00000566328 WDFY4Q6ZS81 3184 aa1.28□□□□□ -2.21
SMG1-212ENST00000566328 PKD1L3Q7Z443 1732 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 USP54Q70EL1 1684 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 ADAMTS7Q9UKP4 1686 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 C10orf71Q711Q0 1435 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 ADCY9O60503 1353 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms