RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NR2F6P10588 404 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 S1PR1P21453 382 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 SSTR4P31391 388 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 CEACAM8P31997 349 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 STX2P32856 288 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 BUD31P41223 144 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 PIK3CGP48736 1102 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 TRPC1P48995 793 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 RAP1GDS1P52306 607 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 CAV1Q03135 178 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 C2orf54Q08AI8 447 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 FUT7Q11130 342 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 DUSP8Q13202 625 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 MYBPHQ13203 477 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 GTF2H2Q13888 395 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 ACAP2Q15057 778 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 CPSF6Q16630 551 aaKnown RBP eCLIP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 FAM83EQ2M2I3 478 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 MROH9Q5TGP6 573 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 BICRALQ6AI39 1079 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 GTF2H2CQ6P1K8 395 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 SLC29A4Q7RTT9 530 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 GOLGA7Q7Z5G4 137 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 CCDC91Q7Z6B0 441 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 CCDC25Q86WR0 208 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 MYLK4Q86YV6 388 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF615Q8N8J6 731 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 RELL2Q8NC24 303 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 MYRIPQ8NFW9 859 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 ADIPOR1Q96A54 375 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 TP53INP1Q96A56 240 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 JSRP1Q96MG2 331 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 GNRHR2Q96P88 292 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 GAL3ST4Q96RP7 486 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 TIMP4Q99727 224 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 SH3GL2Q99962 352 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 PELOQ9BRX2 385 aaKnown RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 CENPKQ9BS16 269 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 TMUB1Q9BVT8 246 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 UBQLN3Q9H347 655 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 EXO5Q9H790 373 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 IPPKQ9H8X2 491 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 SNX15Q9NRS6 342 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF358Q9NW07 568 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 LYARQ9NX58 379 aaKnown RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 UTP11Q9Y3A2 253 aaKnown RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 NINQ8N4C6 2090 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 ARHGAP21Q5T5U3 1957 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 PRRC2AP48634 2157 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 A0A096LPK6 155 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 C2orf92A0A1B0GVN3 265 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 HSPB2A8KAH6 182 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 AHRRA9YTQ3 701 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 SEMA3DO95025 777 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ZWINTO95229 277 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ACSL3O95573 720 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 EPPINO95925 133 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ALDOAP04075 364 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 HPNP05981 417 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 GFAPP14136 432 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 CASQ1P31415 396 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 TIMP3P35625 211 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 SOX18P35713 384 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 KIR2DL3P43628 341 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 WNT3P56703 355 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 FBXW4P57775 412 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ETF1P62495 437 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 CRYZQ08257 329 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 MGAT2Q10469 447 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 RPS6KA2Q15349 733 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 HSPB2Q16082 182 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ACSF3Q4G176 576 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 TBCELQ5QJ74 424 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 UBAP2Q5T6F2 1119 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 METTL2BQ6P1Q9 378 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 CYP20A1Q6UW02 462 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF572Q7Z3I7 529 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 WDR53Q7Z5U6 358 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ZZZ3Q8IYH5 903 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 TAGAPQ8N103 731 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 PLD6Q8N2A8 252 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 TNIP2Q8NFZ5 429 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 OR52B6Q8NGF0 335 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 SPPL2AQ8TCT8 520 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 DIO2Q92813 273 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 REPS1Q96D71 796 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 CDK15Q96Q40 435 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 SECISBP2Q96T21 854 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 FOXC2Q99958 501 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 GPATCH1Q9BRR8 931 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 DOHHQ9BU89 302 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ANGPTL4Q9BY76 406 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 OR10A5Q9H207 317 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 PRM3Q9NNZ6 103 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 RASSF1Q9NS23 344 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ZDHHC18Q9NUE0 388 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 CCM2LQ9NUG4 571 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 TEX10Q9NXF1 929 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 DNAJB12Q9NXW2 375 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 CRIM1Q9NZV1 1036 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms