RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 DGCR6Q14129 220 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 ZNF169Q14929 603 aaPredicted RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 NCF4Q15080 339 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 CNN3Q15417 329 aaKnown RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 STK11Q15831 433 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 AANATQ16613 207 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 PPP1R3AQ16821 1122 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 CTU2Q2VPK5 515 aaKnown RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 SLC25A52Q3SY17 297 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 FAM76BQ5HYJ3 339 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 C10orf62Q5T681 223 aaPredicted RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 NCBP2-AS2Q69YL0 99 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 MRNIPQ6NTE8 343 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 CORO6Q6QEF8 472 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 KLHL17Q6TDP4 642 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 PCSK4Q6UW60 755 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 RANBP10Q6VN20 620 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 GALNT10Q86SR1 603 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 IFNEQ86WN2 208 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 BBS7Q8IWZ6 715 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 CDH26Q8IXH8 852 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 TIGD4Q8IY51 512 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 OR8H3Q8N146 312 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 ZNF567Q8N184 647 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 NKAPQ8N5F7 415 aaKnown RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 Q8N9G6 341 aaPredicted RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 ATG16L2Q8NAA4 619 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 OR4F6Q8NGB9 312 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 HMGCLL1Q8TB92 370 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 TFAP2BQ92481 460 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 CDKN2AIPNLQ96HQ2 116 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 MSLNLQ96KJ4 702 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 C10orf90Q96M02 699 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 SLC46A1Q96NT5 459 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 OR2M2Q96R28 347 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 FCRL5Q96RD9 977 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 SPATA5L1Q9BVQ7 753 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 MND1Q9BWT6 205 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 NFKBIZQ9BYH8 718 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 SRRQ9GZT4 340 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 SHARPINQ9H0F6 387 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 POLR3FQ9H1D9 316 aaPredicted RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 MED28Q9H204 178 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 MINDY3Q9H8M7 445 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 REEP1Q9H902 201 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 RPF1Q9H9Y2 349 aaKnown RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 ARNT2Q9HBZ2 717 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 RANGRFQ9HD47 186 aaPredicted RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 SLC52A3Q9NQ40 469 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 BIN3Q9NQY0 253 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 POLE4Q9NR33 117 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 AKAP7Q9P0M2 348 aaPredicted RBP5.31□□□□□ -1.56
CHD9-210ENST00000564582 AASSQ9UDR5 926 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 EPHA6Q9UF33 1036 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 NDRG3Q9UGV2 375 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 GMEB2Q9UKD1 530 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 TBC1D24Q9ULP9 559 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 MAN2B2Q9Y2E5 1009 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 POFUT2Q9Y2G5 429 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 DNAJC15Q9Y5T4 150 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 PHLPP1O60346 1717 aa5.31□□□□□ -1.56
CHD9-210ENST00000564582 FER1L6Q2WGJ9 1857 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 FOCADQ5VW36 1801 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SBF2Q86WG5 1849 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ARRDC5A6NEK1 342 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 OR6C65A6NJZ3 312 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ZNF98A6NK75 572 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 A8MU76 341 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 MPTX1A8MV57 137 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 MCIDASD6RGH6 385 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ZNF670-ZNF695F2Z2N8 137 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TEX46H3BTG2 121 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 KCNK1O00180 336 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SLC28A1O00337 649 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 B4GAT1O43505 415 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 RGS14O43566 566 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 PTP4A3O75365 173 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SC5DO75845 299 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 C9P02748 559 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 FABP3P05413 133 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 RB1P06400 928 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 TSPAN19P0C672 248 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 SLC2A2P11168 524 aaPredicted RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 NPR1P16066 1061 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 LHCGRP22888 699 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 KELP23276 732 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 HRH2P25021 359 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 MAPK3P27361 379 aaPredicted RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 GTF2E2P29084 291 aaKnown RBP5.3□□□□□ -1.56
CHD9-210ENST00000564582 CHRNA5P30532 468 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 GGT2P36268 569 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 VIPR2P41587 438 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 GRIA1P42261 906 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 MATKP42679 507 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ACOT2P49753 483 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 CLCNKAP51800 687 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 PSPHP78330 225 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 GBE1Q04446 702 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 ITPK1Q13572 414 aa5.3□□□□□ -1.56
CHD9-210ENST00000564582 RAB32Q13637 225 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms