RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 NF1P21359 2839 aa6.34□□□□□ -1.4
CDH11-208ENST00000563492 A0A087X1B8 175 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 C2orf92A0A1B0GVN3 265 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 FIGNL2A6NMB9 653 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TRIM3O75382 744 aaPredicted RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 CTAG2O75638 210 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TRAPPC6AO75865 159 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 KLHL2O95198 593 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 SBK3P0C264 359 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 SLC35E2P0CK97 266 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 CHN1P15882 459 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 SERPINB3P29508 390 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TYK2P29597 1187 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 SERPINB1P30740 379 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TLX1P31314 330 aaPredicted RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 DNAJA1P31689 397 aaKnown RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 STX2P32856 288 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 FEN1P39748 380 aaKnown RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 XKP51811 444 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 ART1P52961 327 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 IST1P53990 364 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 ALDH18A1P54886 795 aaKnown RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 CDH13P55290 713 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 ETF1P62495 437 aaKnown RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 MGAT2Q10469 447 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TRAF3Q13114 568 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 CUL3Q13618 768 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 EXOSC7Q15024 291 aaKnown RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 ACAP2Q15057 778 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 NTRK2Q16620 822 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 FAM83EQ2M2I3 478 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 SPRED3Q2MJR0 410 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 EIPR1Q53HC9 387 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TECRLQ5HYJ1 363 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TCHHL1Q5QJ38 904 aaPredicted RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 DCST1Q5T197 706 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 LIPJQ5W064 366 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 CYP20A1Q6UW02 462 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 ARSKQ6UWY0 536 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 SPNS3Q6ZMD2 512 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 SLC29A4Q7RTT9 530 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 FBXW8Q8N3Y1 598 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TMEM151AQ8N4L1 468 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 RELL2Q8NC24 303 aaPredicted RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 ADCY4Q8NFM4 1077 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 RHEBL1Q8TAI7 183 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 NEIL3Q8TAT5 605 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 DIO2Q92813 273 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 ADIPOR1Q96A54 375 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 SARAFQ96BY9 339 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 HBEGFQ99075 208 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TIMP4Q99727 224 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 DOHHQ9BU89 302 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 NXF5Q9H1B4 397 aaKnown RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 EPB41L4BQ9H329 900 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 ANKRA2Q9H9E1 313 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 ACKR4Q9NPB9 350 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 CCM2LQ9NUG4 571 aaPredicted RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 LYARQ9NX58 379 aaKnown RBP6.33□□□□□ -1.4
CDH11-208ENST00000563492 MS4A12Q9NXJ0 267 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 EHD3Q9NZN3 535 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 CRIM1Q9NZV1 1036 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 ADGRE2Q9UHX3 823 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 PHF11Q9UIL8 331 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 TSC22D4Q9Y3Q8 395 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 PCDHGA11Q9Y5H2 935 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 NPFFR2Q9Y5X5 522 aa6.33□□□□□ -1.4
CDH11-208ENST00000563492 C15orf38-AP3S2A0A0A6YYH1 394 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 C17orf51A8MQB3 221 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 SYCE1LA8MT33 242 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 FOXE1O00358 373 aaPredicted RBP6.32□□□□□ -1.4
CDH11-208ENST00000563492 GNB5O14775 395 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 DYRK3O43781 588 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 HCN1O60741 890 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 WDR1O75083 606 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 ZWINTO95229 277 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 CLDN9O95484 217 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 CTAGE8P0CG41 777 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 CPMP14384 443 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 NT5EP21589 574 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 BMP5P22003 454 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 GDF1P27539 372 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 UQCRC1P31930 480 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 ARL1P40616 181 aaPredicted RBP6.32□□□□□ -1.4
CDH11-208ENST00000563492 BUD31P41223 144 aaPredicted RBP6.32□□□□□ -1.4
CDH11-208ENST00000563492 CASP3P42574 277 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 RIPPLY3P57055 190 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 CAV1Q03135 178 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 CRYZQ08257 329 aaKnown RBP6.32□□□□□ -1.4
CDH11-208ENST00000563492 GALNT1Q10472 559 aaPredicted RBP6.32□□□□□ -1.4
CDH11-208ENST00000563492 FUT7Q11130 342 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 ILF2Q12905 390 aaKnown RBP6.32□□□□□ -1.4
CDH11-208ENST00000563492 NAB1Q13506 487 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 LTB4RQ15722 352 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 ACSF3Q4G176 576 aaPredicted RBP6.32□□□□□ -1.4
CDH11-208ENST00000563492 WIPI1Q5MNZ9 446 aaPredicted RBP6.32□□□□□ -1.4
CDH11-208ENST00000563492 FRG2Q64ET8 278 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 LETMD1Q6P1Q0 360 aa6.32□□□□□ -1.4
CDH11-208ENST00000563492 YRDCQ86U90 279 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms