RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ZNF763Q0D2J5 394 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 SLC13A2Q13183 592 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 HEPACAMQ14CZ8 416 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 ATP6AP1LQ52LC2 224 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 FAM219BQ5XKK7 198 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 OR52E8Q6IFG1 317 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 FAM47BQ8NA70 645 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 OR2T11Q8NH01 316 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 TM4SF18Q96CE8 201 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 FCRL1Q96LA6 429 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 CSF3RQ99062 836 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 CDCP1Q9H5V8 836 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 MEAF6Q9HAF1 191 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 MMP25Q9NPA2 562 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 NECTIN3Q9NQS3 549 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 PNPOQ9NVS9 261 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 PSME2Q9UL46 239 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 NOTCH2Q04721 2471 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 FBN2P35556 2912 aa14.59□□□□□ -0.07
USB1-208ENST00000563207 TRGV8A0A0C4DH27 118 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 TGDSO95455 350 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 STX4Q12846 297 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 PDCD2Q16342 344 aaPredicted RBP14.58□□□□□ -0.08
USB1-208ENST00000563207 RFTN2Q52LD8 501 aaPredicted RBP14.58□□□□□ -0.08
USB1-208ENST00000563207 NDUFAF5Q5TEU4 345 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 IKBIPQ70UQ0 350 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 WDR75Q8IWA0 830 aaKnown RBP14.58□□□□□ -0.08
USB1-208ENST00000563207 M1APQ8TC57 530 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 RELTQ969Z4 430 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 TUBGCP3Q96CW5 907 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 ZNF354BQ96LW1 612 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 C3orf30Q96M34 536 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 ABI3Q9P2A4 366 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 SEC14L3Q9UDX4 400 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 PCDHA9Q9Y5H5 950 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 PTGDR2Q9Y5Y4 395 aa14.58□□□□□ -0.08
USB1-208ENST00000563207 GABRR3A8MPY1 467 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 GPR75O95800 540 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 AIFM1O95831 613 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 ASMTP46597 345 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 HNRNPFP52597 415 aaKnown RBP14.57□□□□□ -0.08
USB1-208ENST00000563207 TAS2R50P59544 299 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 IGLV3-21P80748 117 aaPredicted RBP14.57□□□□□ -0.08
USB1-208ENST00000563207 TERF2Q15554 542 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 OR1C1Q15619 314 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 INAQ16352 499 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 GALNTL6Q49A17 601 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 C6orf136Q5SQH8 315 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 C18orf63Q68DL7 685 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 SP5Q6BEB4 398 aaPredicted RBP14.57□□□□□ -0.08
USB1-208ENST00000563207 NCCRP1Q6ZVX7 275 aaPredicted RBP14.57□□□□□ -0.08
USB1-208ENST00000563207 ZNF227Q86WZ6 799 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 SAMD14Q8IZD0 417 aaPredicted RBP14.57□□□□□ -0.08
USB1-208ENST00000563207 TMEM132CQ8N3T6 1108 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 TMEM52Q8NDY8 209 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.57□□□□□ -0.087e-6■■■■□ 22
USB1-208ENST00000563207 C16orf78Q8WTQ4 265 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 ITLN2Q8WWU7 325 aaPredicted RBP14.57□□□□□ -0.08
USB1-208ENST00000563207 LPAR4Q99677 370 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 PELOQ9BRX2 385 aaKnown RBP14.57□□□□□ -0.08
USB1-208ENST00000563207 MYNNQ9NPC7 610 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 TEX10Q9NXF1 929 aaPredicted RBP14.57□□□□□ -0.08
USB1-208ENST00000563207 EHD3Q9NZN3 535 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 TEKT2Q9UIF3 430 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 DLGAP4Q9Y2H0 992 aa14.57□□□□□ -0.08
USB1-208ENST00000563207 MYOCOSA0A1B0GUC4 107 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 A0A1B0GUH1 482 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 ATP6AP2A0A1C7CYW4 349 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 TGFBR3LH3BV60 316 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 PEX11AO75192 247 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 ATP6AP2O75787 350 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 NEURL1O76050 574 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 KITP10721 976 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 PRPS2P11908 318 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 DDX5P17844 614 aaKnown RBP14.56□□□□□ -0.08
USB1-208ENST00000563207 PIK3R1P27986 724 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 RPL38P63173 70 aaKnown RBP14.56□□□□□ -0.08
USB1-208ENST00000563207 EMX2Q04743 252 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 CDSNQ15517 529 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 EXT1Q16394 746 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 MEP1AQ16819 746 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 RNFT1Q5M7Z0 435 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 SLC48A1Q6P1K1 146 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 FAM9CQ8IZT9 166 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 FNDC5Q8NAU1 212 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 NFAM1Q8NET5 270 aaPredicted RBP14.56□□□□□ -0.08
USB1-208ENST00000563207 OR4K14Q8NGD5 310 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 DNAJB8Q8NHS0 232 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 SUN3Q8TAQ9 357 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 ELP5Q8TE02 316 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 ANKRD9Q96BM1 317 aaPredicted RBP14.56□□□□□ -0.08
USB1-208ENST00000563207 SCMH1Q96GD3 660 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 CCDC120Q96HB5 630 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 UTP23Q9BRU9 249 aaKnown RBP14.56□□□□□ -0.08
USB1-208ENST00000563207 ALOXE3Q9BYJ1 711 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 NUF2Q9BZD4 464 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 CCDC134Q9H6E4 229 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 AKTIPQ9H8T0 292 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 ADAP2Q9NPF8 381 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 ASIC5Q9NY37 505 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms