RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 BCL2L10Q9HD36 194 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 FGF20Q9NP95 211 aaPredicted RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 SNTG1Q9NSN8 517 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 TMEM39AQ9NV64 488 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 C14orf119Q9NWQ9 140 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 TVP23BQ9NYZ1 205 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 TESQ9UGI8 421 aaKnown RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 SLC9A8Q9Y2E8 581 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 FAM172BPA6NC97 362 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 SEC14L5O43304 696 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 B4GALT2O60909 372 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 BMPR1AP36894 532 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 GIPRP48546 466 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 EFNB1P98172 346 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 IFITM2Q01629 132 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 UBE3AQ05086 875 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 SCN1BQ07699 218 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 HSPB3Q12988 150 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 SF3B4Q15427 424 aaKnown RBP eCLIP12.38□□□□□ -0.43
USB1-207ENST00000563149 DUSP6Q16828 381 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 ENTPD8Q5MY95 495 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 PODNL1Q6PEZ8 512 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 ZNF517Q6ZMY9 492 aaPredicted RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 FAM83HQ6ZRV2 1179 aaPredicted RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 SPATC1Q76KD6 591 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 AMZ2Q86W34 360 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 GDPD1Q8N9F7 314 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 OR52I1Q8NGK6 324 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 OR5K2Q8NHB8 316 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 COX14Q96I36 57 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 FNDC11Q9BVV2 318 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 RSPO3Q9BXY4 272 aaPredicted RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 MCOLN1Q9GZU1 580 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 SYNDIG1Q9H7V2 258 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 DDX31Q9H8H2 851 aaKnown RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 TAC3Q9UHF0 121 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 EDDM13A0A1B0GTR0 161 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 TMEM129A0AVI4 362 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 FAM47E-STBD1D6RA91 191 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 RTCAO00442 366 aaKnown RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 NDUFS4O43181 175 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 HOXC11O43248 304 aaPredicted RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 TLX2O43763 284 aaPredicted RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 CYP17A1P05093 508 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 IGFBP1P08833 259 aaPredicted RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 NR2F6P10588 404 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 NR2F1P10589 423 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 ADH5P11766 374 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 IL7P13232 177 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 ADRB3P13945 408 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 TNNI3P19429 210 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 DDOSTP39656 456 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 OPRD1P41143 372 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 KHKP50053 298 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 SMSP52788 366 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 GINS1Q14691 196 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 ZNF79Q15937 498 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 DEFB115Q30KQ5 88 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 PLK5Q496M5 336 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 PRAMEF8Q5VWM4 474 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 PRAMEF7Q5VXH5 474 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 TMEM64Q6YI46 380 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 ERN2Q76MJ5 926 aaKnown RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 NRARPQ7Z6K4 114 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 RBM45Q8IUH3 476 aaKnown RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 ZNF366Q8N895 744 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 CAPSLQ8WWF8 208 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 FGF11Q92914 225 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 EXOSC8Q96B26 276 aaKnown RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 PRRC1Q96M27 445 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 TREX2Q9BQ50 279 aaPredicted RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 OR51I1Q9H343 314 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 MVB12BQ9H7P6 319 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 TXNL4BQ9NX01 149 aaKnown RBP12.38□□□□□ -0.43
USB1-207ENST00000563149 MUTYHQ9UIF7 546 aa12.38□□□□□ -0.43
USB1-207ENST00000563149 LRRK1Q38SD2 2015 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 HMX3A6NHT5 357 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 CASC3O15234 703 aaKnown RBP12.37□□□□□ -0.43
USB1-207ENST00000563149 IDH3BO43837 385 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 PRKYO43930 277 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 CLEC3AO75596 197 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 CDRT1O95170 752 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 FGBP02675 491 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 OR12D1P0DN82 309 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 MYL12AP19105 171 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 MMP11P24347 488 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 WEE1P30291 646 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 NR4A2P43354 598 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 SLC9A3P48764 834 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 DGKEP52429 567 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 WNT4P56705 351 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 RAB40BQ12829 278 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 FOXD4Q12950 439 aaPredicted RBP12.37□□□□□ -0.43
USB1-207ENST00000563149 ASAH1Q13510 395 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 TPBGQ13641 420 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 SYPL1Q16563 259 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 HNRNPA1L2Q32P51 320 aaKnown RBP12.37□□□□□ -0.43
USB1-207ENST00000563149 GLYR1Q49A26 553 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms