RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 FKBP1BP68106 108 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 CDK5Q00535 292 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 DDX39BQ13838 428 aaKnown RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 PUM1Q14671 1186 aaKnown RBP eCLIP9.39□□□□□ -0.91
TCF4-211ENST00000561992 KLHL12Q53G59 568 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 TOR2AQ5JU69 321 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ENTPD8Q5MY95 495 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ZNF648Q5T619 568 aaPredicted RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 TEX261Q6UWH6 196 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 CXCL17Q6UXB2 119 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 CEACAM20Q6UY09 585 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ZNF852Q6ZMS4 543 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 FAM20CQ8IXL6 584 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 GPALPP1Q8IXQ4 340 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 SLC38A6Q8IZM9 456 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 OR52P1PQ8NH57 321 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 LRRC20Q8TCA0 184 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 TM9SF4Q92544 642 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 UBE2E3Q969T4 207 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 UPRTQ96BW1 309 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 NEURL3Q96EH8 262 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ZNF764Q96H86 408 aaPredicted RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 ZNF354BQ96LW1 612 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ZNF582Q96NG8 517 aaPredicted RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 ZNF607Q96SK3 696 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ARHGAP9Q9BRR9 750 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 PRR14Q9BWN1 585 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 JAM3Q9BX67 310 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 SEMA3GQ9NS98 782 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 STOX2Q9P2F5 926 aaPredicted RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 NFKBIL1Q9UBC1 381 aaPredicted RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 NLKQ9UBE8 527 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 CBLCQ9ULV8 474 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 NCKAP1Q9Y2A7 1128 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 U3KQ87 197 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 A0A1B0GVI7 797 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 MYADML2A6NDP7 307 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 NPIPB15A6NHN6 443 aaPredicted RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 A6NJY4 79 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 WWP2O00308 870 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ETHE1O95571 254 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 FHP07954 510 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 SLC10A3P09131 477 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ETV5P41161 510 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ETV1P50549 477 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 GAS1P54826 345 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 LIM2P55344 173 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 DCDC1P59894 354 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 BDH1Q02338 343 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 RGS1Q08116 209 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 CDH18Q13634 790 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 IL18Q14116 193 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 SUZ12Q15022 739 aaKnown RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 CLLU1Q5K131 121 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 COL13A1Q5TAT6 717 aaPredicted RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 CD276Q5ZPR3 534 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 HIST2H2AA3Q6FI13 130 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 TCTN3Q6NUS6 607 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ANKRD54Q6NXT1 300 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 SLCO4C1Q6ZQN7 724 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 KIF18BQ86Y91 864 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 FAM217AQ8IXS0 508 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 SIX5Q8N196 739 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ZNF557Q8N988 423 aaPredicted RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 OR2AP1Q8NGE2 309 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 C16orf78Q8WTQ4 265 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 OR5P2Q8WZ92 322 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 HGDQ93099 445 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 UCN3Q969E3 161 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 RELTQ969Z4 430 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 TRMT2BQ96GJ1 504 aaKnown RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 OR2M2Q96R28 347 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 HDHD5Q9BXW7 423 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 SPNS1Q9H2V7 528 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ELAC1Q9H777 363 aaKnown RBP9.39□□□□□ -0.91
TCF4-211ENST00000561992 EMC3Q9P0I2 261 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 COPZ2Q9P299 210 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 MAP4K5Q9Y4K4 846 aa9.39□□□□□ -0.91
TCF4-211ENST00000561992 ALPK3Q96L96 1907 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 TMEM238LA0A1B0GVL6 79 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 CCDC85CA6NKD9 419 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 ARHGEF33A8MVX0 844 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 AKR7A2O43488 359 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 TLX2O43763 284 aaPredicted RBP9.38□□□□□ -0.91
TCF4-211ENST00000561992 AKAP8O43823 692 aaKnown RBP9.38□□□□□ -0.91
TCF4-211ENST00000561992 IFNA7P01567 189 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 RAF1P04049 648 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 TP53P04637 393 aaPredicted RBP9.38□□□□□ -0.91
TCF4-211ENST00000561992 ATF4P18848 351 aaPredicted RBP9.38□□□□□ -0.91
TCF4-211ENST00000561992 POU3F3P20264 500 aaPredicted RBP9.38□□□□□ -0.91
TCF4-211ENST00000561992 IFNGR2P38484 337 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 KCNJ5P48544 419 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 GIPRP48546 466 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 ACLYP53396 1101 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 RPS13P62277 151 aaKnown RBP9.38□□□□□ -0.91
TCF4-211ENST00000561992 SNRPD1P62314 119 aaKnown RBP9.38□□□□□ -0.91
TCF4-211ENST00000561992 RPS25P62851 125 aaKnown RBP9.38□□□□□ -0.91
TCF4-211ENST00000561992 C2orf80Q0P641 193 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 NAE1Q13564 534 aa9.38□□□□□ -0.91
TCF4-211ENST00000561992 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms