RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FAM3CQ92520 227 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 RORBQ92753 470 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 DHRS1Q96LJ7 313 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 RHNO1Q9BSD3 238 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 FUNDC2Q9BWH2 189 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 NMNAT1Q9HAN9 279 aaPredicted RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 BCL2L10Q9HD36 194 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 ENOPH1Q9UHY7 261 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 SCN3AQ9NY46 2000 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 A0A1W2PS29 197 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 H3BQ06 376 aaPredicted RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 NARSO43776 548 aaKnown RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 TNFP01375 233 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 SLC35G6P0C7Q6 338 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 NR2F6P10588 404 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 MAGP20916 626 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 MAP2K4P45985 399 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 RABIFP47224 123 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 MASP1P48740 699 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 CRISP3P54108 245 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 MVKQ03426 396 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 GPR18Q14330 331 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 LASP1Q14847 261 aaKnown RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 TCTN3Q6NUS6 607 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 TMEM107Q6UX40 140 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 PRSS48Q7RTY5 328 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 P3H2Q8IVL5 708 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 OR13H1Q8NG92 308 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 OR4D11Q8NGI4 311 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 VANGL1Q8TAA9 524 aaPredicted RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 MIPOL1Q8TD10 442 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 GAB3Q8WWW8 586 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 TM4SF19Q96DZ7 209 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 ZNF681Q96N22 645 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 SIGLEC11Q96RL6 698 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 CSF3RQ99062 836 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 C6orf106Q9H6K1 298 aaPredicted RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 ACTR10Q9NZ32 417 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 ENPP5Q9UJA9 477 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 PSME2Q9UL46 239 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 TRBV4-1A0A0J9YWV2 114 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 GSAPA4D1B5 854 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 PRAMEF26H0Y7S4 382 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 EMC8O43402 210 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 SEMA7AO75326 666 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 HMGN2P05204 90 aaKnown RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 IGHV4-34P06331 123 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 POLR2CP19387 275 aaPredicted RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 MPIP34949 423 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 PRR5P85299 388 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 TEKQ02763 1124 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 FUT5Q11128 374 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 GNA13Q14344 377 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 MLIPQ5VWP3 458 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 FCRL6Q6DN72 434 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 FIGLAQ6QHK4 219 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 DEF8Q6ZN54 512 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 SLC16A12Q6ZSM3 486 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 DGLUCYQ7Z3D6 616 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 ANKRD13BQ86YJ7 626 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 SLC22A18ASQ8N1D0 253 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 DEPDC4Q8N2C3 294 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 FLCNQ8NFG4 579 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 OR10G6Q8NH81 332 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 RHOXF1Q8NHV9 184 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 GPBAR1Q8TDU6 330 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 ZFPM2Q8WW38 1151 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 GTPBP3Q969Y2 492 aaKnown RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 OTUB1Q96FW1 271 aaPredicted RBP9.25□□□□□ -0.93
SMG1-205ENST00000561947 OR2A5Q96R48 311 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 YIPF4Q9BSR8 244 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 ROGDIQ9GZN7 287 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 PLCXD1Q9NUJ7 323 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 ANKMY1Q9P2S6 941 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 ACAD8Q9UKU7 415 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 TMCC3Q9ULS5 477 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 ZNF780BQ9Y6R6 833 aa9.25□□□□□ -0.93
SMG1-205ENST00000561947 OR6C74A6NCV1 312 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 FAM227AF5H4B4 570 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 P2RX6O15547 441 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 CTSVO60911 334 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 OXSR1O95747 527 aaPredicted RBP9.24□□□□□ -0.93
SMG1-205ENST00000561947 FADS2O95864 444 aaKnown RBP9.24□□□□□ -0.93
SMG1-205ENST00000561947 GASTP01350 101 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 IGLV3-19P01714 112 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 H1F0P07305 194 aaKnown RBP9.24□□□□□ -0.93
SMG1-205ENST00000561947 CHRM4P08173 479 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 SMIM10L1P0DMW3 83 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 POU2F1P14859 743 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 ACVR2AP27037 513 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 MC3RP41968 323 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 IDH2P48735 452 aaKnown RBP9.24□□□□□ -0.93
SMG1-205ENST00000561947 CCR5P51681 352 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 DCTN2Q13561 401 aaKnown RBP9.24□□□□□ -0.93
SMG1-205ENST00000561947 KIAA0895LQ68EN5 471 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 KLHL17Q6TDP4 642 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 AHSA2Q719I0 299 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 RBM45Q8IUH3 476 aaKnown RBP9.24□□□□□ -0.93
SMG1-205ENST00000561947 LACC1Q8IV20 430 aa9.24□□□□□ -0.93
SMG1-205ENST00000561947 OR9A2Q8NGT5 310 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms