RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	KCTD4	Q8WVF5	259 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	NRGN	Q92686	78 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	REPS1	Q96D71	796 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	SECISBP2	Q96T21	854 aa	Known RBP	12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	TIMP4	Q99727	224 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	TMUB1	Q9BVT8	246 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	ANGPTL4	Q9BY76	406 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	EXO5	Q9H790	373 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	IPPK	Q9H8X2	491 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	ANGPTL3	Q9Y5C1	460 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	MED12	Q93074	2177 aa		12.53	□□□□□ -0.4
RNF31-223	ENST00000560754	C2orf92	A0A1B0GVN3	265 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	LRRC14B	A6NHZ5	514 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	GLOD5	A6NK44	160 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	KLHL2	O95198	593 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	SNX4	O95219	450 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	ZWINT	O95229	277 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	S1PR1	P21453	382 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	STX2	P32856	288 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	TIMP3	P35625	211 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	NEK2	P51955	445 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	DUSP8	Q13202	625 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	GTF2H2	Q13888	395 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	FBXL19-AS1	Q494R0	122 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	MROH9	Q5TGP6	573 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	FNDC7	Q5VTL7	733 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	TMEM198	Q66K66	360 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	VASN	Q6EMK4	673 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	GTF2H2C	Q6P1K8	395 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	ZDHHC24	Q6UX98	284 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	TMEM200A	Q86VY9	491 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	TAGAP	Q8N103	731 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	ZNF615	Q8N8J6	731 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	FAM13C	Q8NE31	585 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	NINJ1	Q92982	152 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	ADIPOR1	Q96A54	375 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	FOXC2	Q99958	501 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	UBQLN3	Q9H347	655 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	ACTR8	Q9H981	624 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	CXorf21	Q9HAI6	301 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	ZNF358	Q9NW07	568 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	DNAJB12	Q9NXW2	375 aa	Known RBP	12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	UTP11	Q9Y3A2	253 aa	Known RBP	12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	RNF11	Q9Y3C5	154 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	TNPO3	Q9Y5L0	923 aa	Known RBP	12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	NPFFR2	Q9Y5X5	522 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	KIAA1549	Q9HCM3	1950 aa		12.52	□□□□□ -0.41
RNF31-223	ENST00000560754	CAPN14	A8MX76	684 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	TP53I11	O14683	189 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	OR10H2	O60403	315 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	CLDN9	O95484	217 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	HPN	P05981	417 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	KIR2DL3	P43628	341 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	PHEX	P78562	749 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	IRF9	Q00978	393 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	CRYZ	Q08257	329 aa	Known RBP	12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	SLMAP	Q14BN4	828 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	DAZAP2	Q15038	168 aa	Predicted RBP	12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	NHSL2	Q5HYW2	709 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	CYP20A1	Q6UW02	462 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	TMEM64	Q6YI46	380 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	GOLGA7	Q7Z5G4	137 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	C17orf47	Q8NEP4	570 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	SPPL2A	Q8TCT8	520 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	DIO2	Q92813	273 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	SH3GL2	Q99962	352 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	DOHH	Q9BU89	302 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	NTMT1	Q9BV86	223 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	PRDM14	Q9GZV8	571 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	RAB17	Q9H0T7	212 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	SLC6A15	Q9H2J7	730 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	LIME1	Q9H400	295 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	WDR41	Q9HAD4	459 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	SNX15	Q9NRS6	342 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	RASSF1	Q9NS23	344 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	FETUB	Q9UGM5	382 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	PYCARD	Q9ULZ3	195 aa		12.51	□□□□□ -0.41
RNF31-223	ENST00000560754	OR7A17	O14581	309 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	SEMA3D	O95025	777 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	ACSL3	O95573	720 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	AIFM1	O95831	613 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	ALDOA	P04075	364 aa	Known RBP	12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	NR2F6	P10588	404 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	GFAP	P14136	432 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	NAGA	P17050	411 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	PIK3R1	P27986	724 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	SSTR4	P31391	388 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	CASP3	P42574	277 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	PIK3CG	P48736	1102 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	TRPC1	P48995	793 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	CDK9	P50750	372 aa	Known RBP	12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	FBXW4	P57775	412 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	RPS6KA2	Q15349	733 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	CCDC25	Q86WR0	208 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	NUDT13	Q86X67	352 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	MYLK4	Q86YV6	388 aa	Predicted RBP	12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	ZZZ3	Q8IYH5	903 aa		12.5	□□□□□ -0.41

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