RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FAM13CQ8NE31 585 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 OR2L5Q8NG80 312 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 SLC22A8Q8TCC7 542 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 SLC44A1Q8WWI5 657 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 ANKRD9Q96BM1 317 aaPredicted RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 FAR2Q96K12 515 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 SFXN3Q9BWM7 321 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 PHACTR1Q9C0D0 580 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 CNOT10Q9H9A5 744 aaKnown RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 CALHM2Q9HA72 323 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 C20orf96Q9NUD7 363 aaPredicted RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 COPS7AQ9UBW8 275 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 SLC22A14Q9Y267 594 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 DYRK1BQ9Y463 629 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 CR1P17927 2039 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 ROS1P08922 2347 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 USF3Q68DE3 2245 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 MED12LQ86YW9 2145 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 FGF17O60258 216 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 SOX30O94993 753 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 ACSL3O95573 720 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 HIST1H2AGP0C0S8 130 aaPredicted RBP9.04□□□□□ -0.96
TPM1-225ENST00000560679 HIST1H2ADP20671 130 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 FPR1P21462 350 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 LSP1P33241 339 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 MAGEA3P43357 314 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 CPA2P48052 419 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 GUCY1A3Q02108 690 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 TBL3Q12788 808 aaKnown RBP9.04□□□□□ -0.96
TPM1-225ENST00000560679 STX4Q12846 297 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 SERTAD2Q14140 314 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 SLBPQ14493 270 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM1-225ENST00000560679 EFTUD2Q15029 972 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM1-225ENST00000560679 NTRK2Q16620 822 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 EIPR1Q53HC9 387 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 HSP90AA5PQ58FG0 334 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 ABHD17CQ6PCB6 329 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 C4orf22Q6V702 233 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 ZNF793Q6ZN11 406 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 C20orf204Q6ZNR8 217 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 SLCO4C1Q6ZQN7 724 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 ADGRE4PQ86SQ3 457 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 GCNT2Q8N0V5 402 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 C2CD4AQ8NCU7 369 aaPredicted RBP9.04□□□□□ -0.96
TPM1-225ENST00000560679 MAPK1IP1LQ8NDC0 245 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 UHMK1Q8TAS1 419 aaKnown RBP9.04□□□□□ -0.96
TPM1-225ENST00000560679 EPS8L3Q8TE67 593 aaKnown RBP9.04□□□□□ -0.96
TPM1-225ENST00000560679 ATL1Q8WXF7 558 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 CCT6BQ92526 530 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 SENP5Q96HI0 755 aaPredicted RBP9.04□□□□□ -0.96
TPM1-225ENST00000560679 HIST1H2AHQ96KK5 128 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 SERPINB12Q96P63 405 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 SERINC2Q96SA4 455 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 HIST1H2AJQ99878 128 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 H2AFJQ9BTM1 129 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 G6PC3Q9BUM1 346 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 IARS2Q9NSE4 1012 aaKnown RBP9.04□□□□□ -0.96
TPM1-225ENST00000560679 TAS2R13Q9NYV9 303 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 CNIH4Q9P003 139 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 PRDM4Q9UKN5 801 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 C15orf41Q9Y2V0 281 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 IKBKGQ9Y6K9 419 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 HEATR5AQ86XA9 2040 aa9.04□□□□□ -0.96
TPM1-225ENST00000560679 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 TLDC2A0PJX2 215 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 SMIM23A6NLE4 172 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 A8MXE2 369 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 CASKO14936 926 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 TRAPPC6AO75865 159 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 CLPSP04118 112 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 ENO2P09104 434 aaPredicted RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 PAX1P15863 534 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 TNNI3P19429 210 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 CRYGSP22914 178 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 CPOXP36551 454 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 MAGEA4P43358 317 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 NAGLUP54802 743 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 MTTPP55157 894 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 HNRNPH2P55795 449 aaKnown RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 IGLV3-21P80748 117 aaPredicted RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 TNK1Q13470 666 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 EBPQ15125 230 aaKnown RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 C18orf21Q32NC0 220 aaPredicted RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 TNFAIP8L3Q5GJ75 292 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 TTC19Q6DKK2 380 aaPredicted RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 HEPHL1Q6MZM0 1159 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 TMIGD1Q6UXZ0 262 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 UBE3DQ7Z6J8 389 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 LMNTD2Q8IXW0 634 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 PPIL6Q8IXY8 311 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 SLC15A4Q8N697 577 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 ZNF441Q8N8Z8 693 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 DOK4Q8TEW6 326 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 PIK3IP1Q96FE7 263 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 FBXL20Q96IG2 436 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 WFIKKN1Q96NZ8 548 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 GNRHR2Q96P88 292 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 MAPKAP1Q9BPZ7 522 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 TUBA1CQ9BQE3 449 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 876 ms