RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 ALDH6A1Q02252 535 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 BIKQ13323 160 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 PRSS53Q2L4Q9 553 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 EXOC3L1Q86VI1 746 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 GALNT12Q8IXK2 581 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 OR2T11Q8NH01 316 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 OR8K3Q8NH51 312 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 DNAJB8Q8NHS0 232 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 EXOSC8Q96B26 276 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 CNRIP1Q96F85 164 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 ART5Q96L15 291 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 FAIM2Q9BWQ8 316 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 BRINP2Q9C0B6 783 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 WWTR1Q9GZV5 400 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 TUBB1Q9H4B7 451 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 UTS2RQ9UKP6 389 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 NPIPA1Q9UND3 350 aa13.73□□□□□ -0.21
RABGGTA-211ENST00000559850 HIVEP3Q5T1R4 2406 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 SERTM1A2A2V5 107 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 NME6O75414 186 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 LRATO95237 230 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 LINC00032P0C843 101 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 SOX18P35713 384 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 NR0B1P51843 470 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 NAA20P61599 178 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 TRA2BP62995 288 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 C2orf80Q0P641 193 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 MGAT2Q10469 447 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 DUSP8Q13202 625 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 EXOSC7Q15024 291 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 EBPQ15125 230 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 PIGGQ5H8A4 983 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 ARL13AQ5H913 290 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 C1QL3Q5VWW1 255 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 CES4AQ5XG92 561 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 KANK2Q63ZY3 851 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 SLC29A4Q7RTT9 530 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 FAM98AQ8NCA5 519 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 PSD4Q8NDX1 1056 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 C7orf57Q8NEG2 295 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 NUBPLQ8TB37 319 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 C11orf24Q96F05 449 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 ZNF681Q96N22 645 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 ANKRA2Q9H9E1 313 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 TIMMDC1Q9NPL8 285 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 PFDN4Q9NQP4 134 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 MAT2BQ9NZL9 334 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 GIMAP2Q9UG22 337 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 SH3BGRL2Q9UJC5 107 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 KLF13Q9Y2Y9 288 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 CCL27Q9Y4X3 112 aa13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 RP1L1Q8IWN7 2480 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-211ENST00000559850 USP9XQ93008 2570 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 UTP20O75691 2785 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 GOLGA6L10A6NI86 522 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 LRRTM2O43300 516 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 NPHS1O60500 1241 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 BPGMP07738 259 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 CCL3P10147 92 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 ZNF24P17028 368 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 CSNK2A2P19784 350 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 GALNSP34059 522 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 ETV4P43268 484 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 MRPS35P82673 323 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 FUT7Q11130 342 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 NNATQ16517 81 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 PRICKLE4Q2TBC4 344 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 C6orf163Q5TEZ5 329 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 OPN5Q6U736 354 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 LYPD8Q6UX82 237 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 RTL4Q6ZR62 310 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 SIAH3Q8IW03 269 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 CCDC116Q8IYX3 515 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 PRR22Q8IZ63 422 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 ZNF615Q8N8J6 731 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 OR5M3Q8NGP4 307 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 SSC4DQ8WTU2 575 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 OR10A5Q9H207 317 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 ZNF395Q9H8N7 513 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 RRAGDQ9NQL2 400 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 BCAP29Q9UHQ4 241 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 DTX4Q9Y2E6 619 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 DNAJC15Q9Y5T4 150 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 ZNF780BQ9Y6R6 833 aa13.71□□□□□ -0.21
RABGGTA-211ENST00000559850 C2orf92A0A1B0GVN3 265 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 A1L4Q6 167 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 FAM166BA8MTA8 275 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 H3BQF6 201 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 KLRC4-KLRK1H3BQV0 150 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 CTIFO43310 598 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 HS6ST1O60243 411 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 SEC22BO75396 215 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 LYPLA1O75608 230 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 RSL1D1O76021 490 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 PCSK2P16519 638 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 S1PR1P21453 382 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 TACR1P25103 407 aa13.7□□□□□ -0.22
RABGGTA-211ENST00000559850 DNASE1L1P49184 302 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms