RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SNAI3Q3KNW1 292 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 ITPRIPL2Q3MIP1 535 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 POM121L1PQ3SYA9 428 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 PHLDA2Q53GA4 152 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 CT45A2Q5DJT8 189 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 PMF1Q6P1K2 205 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 CTR9Q6PD62 1173 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 CYP4V2Q6ZWL3 525 aaPredicted RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 FAM131BQ86XD5 332 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 TMEM139Q8IV31 216 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 SLC43A2Q8N370 569 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 BBS5Q8N3I7 341 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 MAPKAPK5-AS1Q8N8E1 139 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 GBP7Q8N8V2 638 aaPredicted RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 SMYD1Q8NB12 490 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 COLGALT1Q8NBJ5 622 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 KBTBD8Q8NFY9 601 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 OR11H4Q8NGC9 324 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 OR4C3Q8NH37 302 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 GIPC3Q8TF64 312 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 METTL21AQ8WXB1 218 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 SEPT8Q92599 483 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 ZNF75CPQ92670 426 aaPredicted RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 CASP10Q92851 521 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 FBXO32Q969P5 355 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 SLC41A3Q96GZ6 507 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 DHTKD1Q96HY7 919 aaPredicted RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 COG3Q96JB2 828 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 NSMCE3Q96MG7 304 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 ZNF300Q96RE9 604 aaPredicted RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 USP28Q96RU2 1077 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 C5orf66Q9H5L9 145 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 RNF121Q9H920 327 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 RPS10P5Q9NQ39 176 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 DDX18Q9NVP1 670 aaKnown RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 CHRNA9Q9UGM1 479 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 BCAP29Q9UHQ4 241 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 GRID1Q9ULK0 1009 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 MOB4Q9Y3A3 225 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 RIPK3Q9Y572 518 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 ZHX2Q9Y6X8 837 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 MBLAC1A4D2B0 266 aaPredicted RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 FAM47DPA6NHR8 397 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 E5RGE8 158 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 H0YIV9 168 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 BOLA2-SMG1P6H3BVE0 249 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 L7N2F9 121 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 PRRG1O14668 218 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 SDC3O75056 442 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 DFFBO76075 338 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 UGT2B4P06133 528 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 GPIP06744 558 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 YES1P07947 543 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 HIST1H2AGP0C0S8 130 aaPredicted RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 ZCCHC18P0CG32 403 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 UGT1A4P22310 534 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 SHC1P29353 583 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 DUTP33316 252 aaKnown RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 OR1D2P34982 312 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 CHI3L1P36222 383 aaPredicted RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 CETN2P41208 172 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 ALDH3B1P43353 468 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 TNNT2P45379 298 aaPredicted RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 SLC1A6P48664 564 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 CLDN17P56750 224 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 ACTR3P61158 418 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 DMPKQ09013 629 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 IFT88Q13099 833 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 NME3Q13232 169 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 RFTN1Q14699 578 aaPredicted RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 TMEM132DQ14C87 1099 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 SPHARQ15513 63 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 GPAT3Q53EU6 434 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 AGKQ53H12 422 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 C2CD6Q53TS8 623 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 CAVIN4Q5BKX8 364 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 ZNF542PQ5EBM4 170 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 ZNF311Q5JNZ3 666 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 NIPAL3Q6P499 406 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 CBLN3Q6UW01 205 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 ANGPTL8Q6UXH0 198 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 BNIPLQ7Z465 357 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 CPEB2Q7Z5Q1 589 aaKnown RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 LUZP1Q86V48 1076 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 VPS36Q86VN1 386 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 SLC22A9Q8IVM8 553 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 RCOR2Q8IZ40 523 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 BHLHE23Q8NDY6 225 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 ZNF397Q8NF99 534 aaPredicted RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 ZNF671Q8TAW3 534 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 ATP8B4Q8TF62 1192 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 GIMAP1Q8WWP7 306 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 PHYHIPQ92561 330 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 HIST1H2ACQ93077 130 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 RBM41Q96IZ5 413 aaKnown RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 C4orf36Q96KX1 117 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 BTBD9Q96Q07 612 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 S1PR3Q99500 378 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 WRAP53Q9BUR4 548 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms