RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 OR8D2Q9GZM6 311 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 WDR41Q9HAD4 459 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 MMP25Q9NPA2 562 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 TCF7L2Q9NQB0 619 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 SIRT3Q9NTG7 399 aaPredicted RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 GPR83Q9NYM4 423 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 ERVK-19Q9WJR5 959 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 TRBV11-1A0A0K0K1C0 115 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 PCDH17O14917 1159 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 GUCY1B2O75343 617 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 VPS4BO75351 444 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 F10P00742 488 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 VIMP08670 466 aaKnown RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 PORP16435 677 aaPredicted RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 PCSK2P16519 638 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 CSNK2A2P19784 350 aaPredicted RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 NT5EP21589 574 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 DRD4P21917 467 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 GPX3P22352 226 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 ITGA3P26006 1051 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 GSTM5P46439 218 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 DGKQP52824 942 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 SLC37A1P57057 533 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 PLIN5Q00G26 463 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 FUT7Q11130 342 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 ZNF267Q14586 743 aaPredicted RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 MYBPC3Q14896 1274 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 SPANXN4Q5MJ08 99 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 OR4F3Q6IEY1 312 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 FUNDC1Q8IVP5 155 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 KBTBD2Q8IY47 623 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 CLECL1Q8IZS7 167 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 KIRREL3Q8IZU9 778 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 CLEC4FQ8N1N0 589 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 LRRC25Q8N386 305 aaPredicted RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 OR14A16Q8NHC5 309 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 M1APQ8TC57 530 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 C10orf82Q8WW14 230 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 RIT1Q92963 219 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 PPCDCQ96CD2 204 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 COQ8BQ96D53 544 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 ABHD17AQ96GS6 310 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 SENP5Q96HI0 755 aaPredicted RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 FER1L6-AS2Q96M78 137 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 CNPPD1Q9BV87 410 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 RABEP2Q9H5N1 569 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 ATP13A2Q9NQ11 1180 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 SLC52A3Q9NQ40 469 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 MIEF1Q9NQG6 463 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 SDR39U1Q9NRG7 319 aaPredicted RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 EIF3LQ9Y262 564 aaKnown RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 TP53TG5Q9Y2B4 290 aa10.13□□□□□ -0.79
TPM1-217ENST00000559108 COPG1Q9Y678 874 aaKnown RBP10.13□□□□□ -0.79
TPM1-217ENST00000559108 TLN1Q9Y490 2541 aaKnown RBP10.12□□□□□ -0.79
TPM1-217ENST00000559108 A0A0G2JND7 137 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 ASPDHA6ND91 283 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 OR10H2O60403 315 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 TGDSO95455 350 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 COX7A2P14406 83 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 TNNI3P19429 210 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 PRPS1L1P21108 318 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 MAPK1P28482 360 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 GALNSP34059 522 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 MC3RP41968 323 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 ASMTP46597 345 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 NCBP2P52298 156 aaKnown RBP eCLIP10.12□□□□□ -0.79
TPM1-217ENST00000559108 RRADP55042 308 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 MAP4K2Q12851 820 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 KCNAB2Q13303 367 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 PAOXQ6QHF9 649 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 TMEM107Q6UX40 140 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 SPATA19Q7Z5L4 167 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 WDR53Q7Z5U6 358 aaPredicted RBP10.12□□□□□ -0.79
TPM1-217ENST00000559108 CAMKMTQ7Z624 323 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 ZNF227Q86WZ6 799 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 GALNT12Q8IXK2 581 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 ARMC10Q8N2F6 343 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 CLEC1AQ8NC01 280 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 MORN4Q8NDC4 146 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 OR1N1Q8NGS0 311 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 CEP70Q8NHQ1 597 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 ZNF675Q8TD23 568 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 THAP3Q8WTV1 239 aaPredicted RBP10.12□□□□□ -0.79
TPM1-217ENST00000559108 LMF1Q96S06 567 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 CCDC28BQ9BUN5 200 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 LHPPQ9H008 270 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 CLMPQ9H6B4 373 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 ZNF71Q9NQZ8 489 aaPredicted RBP10.12□□□□□ -0.79
TPM1-217ENST00000559108 SH3BP4Q9P0V3 963 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 PTGFRNQ9P2B2 879 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 WBP11Q9Y2W2 641 aaKnown RBP10.12□□□□□ -0.79
TPM1-217ENST00000559108 CLCA3PQ9Y6N3 262 aa10.12□□□□□ -0.79
TPM1-217ENST00000559108 BOD1L1Q8NFC6 3051 aa10.11□□□□□ -0.79
TPM1-217ENST00000559108 CHD6Q8TD26 2715 aa10.11□□□□□ -0.79
TPM1-217ENST00000559108 UBDO15205 165 aa10.11□□□□□ -0.79
TPM1-217ENST00000559108 PDPK1O15530 556 aa10.11□□□□□ -0.79
TPM1-217ENST00000559108 PSMG1O95456 288 aa10.11□□□□□ -0.79
TPM1-217ENST00000559108 NADKO95544 446 aaPredicted RBP10.11□□□□□ -0.79
TPM1-217ENST00000559108 C6orf47O95873 294 aa10.11□□□□□ -0.79
TPM1-217ENST00000559108 HPCAL1P37235 193 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms