RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 TMEM237Q96Q45 408 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 FRG2BQ96QU4 278 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TAAR6Q96RI8 345 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 CCDC77Q9BR77 488 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 ERVK-6Q9BXR3 956 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 ADAP2Q9NPF8 381 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 PNO1Q9NRX1 252 aaKnown RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 FARSBQ9NSD9 589 aaKnown RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 GPATCH2Q9NW75 528 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 STMN3Q9NZ72 180 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TEKT2Q9UIF3 430 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TMEFF2Q9UIK5 374 aaPredicted RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 FBXW2Q9UKT8 454 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 PPIEQ9UNP9 301 aaKnown RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 CENPEQ02224 2701 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 A0A0A6YYD5 115 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SMIM23A6NLE4 172 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 GABRR3A8MPY1 467 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 FGF17O60258 216 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PRKNO60260 465 aaPredicted RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PRAMEF2O60811 474 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 CTNSO60931 367 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PRKRAO75569 313 aaKnown RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 OR4F21O95013 312 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 CBX6O95503 412 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 OTCP00480 354 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TAC1P20366 129 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 CPN2P22792 545 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ATP5F1P24539 256 aaPredicted RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PTX3P26022 381 aaPredicted RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 CD96P40200 585 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ARFIP1P53367 373 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TAS2R50P59544 299 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PHEXP78562 749 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 IGLV3-21P80748 117 aaPredicted RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ID2Q02363 134 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SLAMF1Q13291 335 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 RCN2Q14257 317 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 RASA2Q15283 850 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ELAVL1Q15717 326 aaKnown RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 INAQ16352 499 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 MEP1AQ16819 746 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TCHHL1Q5QJ38 904 aaPredicted RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZNF678Q5SXM1 525 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 C18orf63Q68DL7 685 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 MILR1Q7Z6M3 343 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 LGI4Q8N135 537 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZCCHC7Q8N3Z6 543 aaKnown RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SLC5A8Q8N695 610 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 B3GNT7Q8NFL0 401 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 OR2W6PQ8NHA6 318 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TRPC4APQ8TEL6 797 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 FAR1Q8WVX9 515 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 NCLNQ969V3 563 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ANKRD9Q96BM1 317 aaPredicted RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 MTFMTQ96DP5 389 aaKnown RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SIGLEC12Q96PQ1 595 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SLX1AQ9BQ83 275 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 CENPKQ9BS16 269 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 HES7Q9BYE0 225 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ALOXE3Q9BYJ1 711 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SLC29A3Q9BZD2 475 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 CDCP1Q9H5V8 836 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 DDX31Q9H8H2 851 aaKnown RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ANKRD10Q9NXR5 420 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PSD3Q9NYI0 1048 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TRPS1Q9UHF7 1281 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ATG4BQ9Y4P1 393 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ASB4Q9Y574 426 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 V9GYY5 206 aaPredicted RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 NAV2Q8IVL1 2488 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TRBV11-1A0A0K0K1C0 115 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TMEM200CA6NKL6 621 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 WASHC1A8K0Z3 465 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 G3V2L1 256 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PLIN3O60664 434 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 GLRA3O75311 464 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 NEURL1O76050 574 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SUPT7LO94864 414 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SEMA3DO95025 777 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SLU7O95391 586 aaKnown RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 DDAH2O95865 285 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PDYNP01213 254 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 GBAP04062 536 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PROCP04070 461 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 IFNA16P05015 189 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 NUDT17P0C025 328 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TPP2P29144 1249 aaPredicted RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 CLCN2P51788 898 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PRKAA2P54646 552 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 MLF1P58340 268 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 PMP22Q01453 160 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 TNFRSF17Q02223 184 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 STX4Q12846 297 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 SERTAD2Q14140 314 aa5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 EIF2S3LQ2VIR3 472 aaKnown RBP5.6□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZNF324BQ6AW86 544 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms