RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 TAS2R7Q9NYW3 318 aa17.55■□□□□ 0.4
RABGGTA-208ENST00000558954 NOP53Q9NZM5 478 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-208ENST00000558954 MARCOQ9UEW3 520 aaPredicted RBP17.55■□□□□ 0.4
RABGGTA-208ENST00000558954 CSAG2Q9Y5P2 127 aa17.55■□□□□ 0.4
RABGGTA-208ENST00000558954 SHANK1Q9Y566 2161 aa17.55■□□□□ 0.4
RABGGTA-208ENST00000558954 TRPC5OSA6NMA1 111 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 GABRR3A8MPY1 467 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 HRKO00198 91 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 SUV39H1O43463 412 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 MAN1A2O60476 641 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 PRPS2P11908 318 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 NTSP30990 170 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 HPCAL1P37235 193 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 RNF4P78317 190 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 ZNF169Q14929 603 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 CEBPEQ15744 281 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 FAM180BQ6P0A1 224 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 SLC29A4Q7RTT9 530 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 PRICKLE2Q7Z3G6 844 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 LRRC34Q8IZ02 419 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 LIX1Q8N485 282 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 OR5L2Q8NGL0 311 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 CLHC1Q8NHS4 586 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 BBS4Q96RK4 519 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 UTP23Q9BRU9 249 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 BRINP2Q9C0B6 783 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 MED4Q9NPJ6 270 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 PLA2G3Q9NZ20 509 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 EIF3LQ9Y262 564 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 SMG1Q96Q15 3661 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 ZNF462Q96JM2 2506 aa17.54■□□□□ 0.4
RABGGTA-208ENST00000558954 SVILO95425 2214 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 TRAV17A0A0B4J275 112 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 OR6C76A6NM76 312 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 PRKNO60260 465 aaPredicted RBP17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 ITGA10O75578 1167 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 SORBS2O94875 1100 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 F10P00742 488 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 KITP10721 976 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 DDX5P17844 614 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 MPIP34949 423 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 RPL3P39023 403 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 TNFSF10P50591 281 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 DUSP2Q05923 314 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 FUT7Q11130 342 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 PRICKLE4Q2TBC4 344 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 IL23RQ5VWK5 629 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 C9orf40Q8IXQ3 194 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 FAM9CQ8IZT9 166 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 OR7G1Q8NGA0 311 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 NUBPLQ8TB37 319 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 PIWIL2Q8TC59 973 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 ZNF675Q8TD23 568 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 DOK4Q8TEW6 326 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 GFM2Q969S9 779 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 PPCDCQ96CD2 204 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 MTERF3Q96E29 417 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 C7orf26Q96N11 449 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 REEP4Q9H6H4 257 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 AKTIPQ9H8T0 292 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 SLAMF7Q9NQ25 335 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 ASIC5Q9NY37 505 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 MAT2BQ9NZL9 334 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 LUZP4Q9P127 313 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 MYOTQ9UBF9 498 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 BAIAP2L1Q9UHR4 511 aa17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 EXO1Q9UQ84 846 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-208ENST00000558954 ATP8B1O43520 1251 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 AKAP10O43572 662 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 TBX19O60806 448 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 LRATO95237 230 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 CT62P0C5K7 136 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 SSTR4P31391 388 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 SSR4P51571 173 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 SLC37A1P57057 533 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 EMX2Q04743 252 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 MAP4K2Q12851 820 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 TUBA3CQ13748 450 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 PDE7AQ13946 482 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 PTGR1Q14914 329 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 LTB4RQ15722 352 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 COLEC12Q5KU26 742 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 TUBA3EQ6PEY2 450 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 R3HCC1LQ7Z5L2 792 aaKnown RBP17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 HORMAD2Q8N7B1 307 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 ADCY4Q8NFM4 1077 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 SUN3Q8TAQ9 357 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 ERP27Q96DN0 273 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 GAL3ST4Q96RP7 486 aa17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 YARS2Q9Y2Z4 477 aaKnown RBP17.52■□□□□ 0.4
RABGGTA-208ENST00000558954 PRRC2CQ9Y520 2896 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 TMEM200CA6NKL6 621 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 MYO1GB0I1T2 1018 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 SCAMP2O15127 329 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 PDPK1O15530 556 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 OR2J2O76002 312 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 SLITRK5O94991 958 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 LBPP18428 481 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 PTGER1P34995 402 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms