RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 LRRC25Q8N386 305 aaPredicted RBP14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 SNRNP40Q96DI7 357 aaKnown RBP14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 EGLN2Q96KS0 407 aa14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 TSSK3Q96PN8 268 aa14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 C1orf50Q9BV19 199 aa14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 HES7Q9BYE0 225 aa14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 VIPAS39Q9H9C1 493 aa14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 LRFN1Q9P244 771 aa14.72□□□□□ -0.05
RABGGTA-206ENST00000558649 TMEM200CA6NKL6 621 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 AKAP10O43572 662 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 PRAMEF2O60811 474 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 SASH3O75995 380 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 SDC1P18827 310 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 GALNSP34059 522 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 CYB561P49447 251 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 RPL14P50914 215 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 SLC18A1P54219 525 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 FAM71E1Q6IPT2 247 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 FAM111BQ6SJ93 734 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 HOMEZQ8IX15 550 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 CCDC116Q8IYX3 515 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 VWA5B2Q8N398 1253 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 OR5L2Q8NGL0 311 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 ASB15Q8WXK1 588 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 TUBGCP3Q96CW5 907 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 METTL2AQ96IZ6 378 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 PPP3R2Q96LZ3 170 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 C5orf34Q96MH7 638 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 BBS4Q96RK4 519 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 CCT7Q99832 543 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 SH3GL2Q99962 352 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 SLC35C2Q9NQQ7 365 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 ASF1BQ9NVP2 202 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 PNPOQ9NVS9 261 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 MYOTQ9UBF9 498 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 BAIAP2L1Q9UHR4 511 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 ERVK-11Q9UQG0 969 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 NTNG1Q9Y2I2 539 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 YARS2Q9Y2Z4 477 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 COPG1Q9Y678 874 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 CROCCQ5TZA2 2017 aa14.71□□□□□ -0.05
RABGGTA-206ENST00000558649 NPIPB8E9PQR5 432 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 SLC25A12O75746 678 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 CLPSP04118 112 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 ATP1B1P05026 303 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 CD46P15529 392 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 SOX3P41225 446 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 HLCSP50747 726 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 SLC37A1P57057 533 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 MRPS35P82673 323 aaKnown RBP14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 PMP22Q01453 160 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 EXOSC7Q15024 291 aaKnown RBP14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 PRSS53Q2L4Q9 553 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 PRICKLE4Q2TBC4 344 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 ANKRD26P1Q6NSI1 321 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 FAM180AQ6UWF9 173 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 IKBIPQ70UQ0 350 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 CYP4Z2PQ8N1L4 340 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 ARMC10Q8N2F6 343 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 LIX1Q8N485 282 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 HORMAD2Q8N7B1 307 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 FNDC5Q8NAU1 212 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 MDS2Q8NDY4 140 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 OR9A2Q8NGT5 310 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 OR8K3Q8NH51 312 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 ZNF681Q96N22 645 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 RASL10BQ96S79 203 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 MANSC1Q9H8J5 431 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 MAT2BQ9NZL9 334 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 MARCOQ9UEW3 520 aaPredicted RBP14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 BCAP29Q9UHQ4 241 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 TMED5Q9Y3A6 229 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 ZNF462Q96JM2 2506 aa14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 SPENQ96T58 3664 aaKnown RBP14.7□□□□□ -0.06
RABGGTA-206ENST00000558649 UQCRHLA0A096LP55 91 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 A8MVJ9 347 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 HMGB1P1B2RPK0 211 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 NEURL1O76050 574 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 OR6B1O95007 311 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 SNUPNO95149 360 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 KITP10721 976 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 BCKDHAP12694 445 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 PCSK2P16519 638 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 MAPK1P28482 360 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 NTSP30990 170 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 TRHRP34981 398 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 NCBP2P52298 156 aaKnown RBP eCLIP14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 FOXK1P85037 733 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 SRSF11Q05519 484 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 MAPKAPK3Q16644 382 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 HLA-DQA1Q5Y7H0 255 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 ATG16L1Q676U5 607 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 IL20RBQ6UXL0 311 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 TRIM42Q8IWZ5 723 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 SIMC1Q8NDZ2 872 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 GRHL3Q8TE85 626 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 KAT2AQ92830 837 aa14.69□□□□□ -0.06
RABGGTA-206ENST00000558649 TMEM125Q96AQ2 219 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms