RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 DUXAA6NLW8 204 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 IDSB3KWA1 339 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 CLIC1O00299 241 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 RAD1O60671 282 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 LDB3O75112 727 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 ALOX12BO75342 701 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 GMNNO75496 209 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 RECKO95980 971 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 TCN2P20062 427 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 SOAT1P35610 550 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 CPA2P48052 419 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 CCT3P49368 545 aaKnown RBP11.62□□□□□ -0.55
TPM1-209ENST00000558072 PRIM2P49643 509 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 EEFSECP57772 596 aaKnown RBP11.62□□□□□ -0.55
TPM1-209ENST00000558072 HBA1P69905 142 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 PHC1P78364 1004 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 RHAGQ02094 409 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 HSPB3Q12988 150 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 CAMK2BQ13554 666 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 GNA13Q14344 377 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 SSPNQ14714 243 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 SPRED3Q2MJR0 410 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 RUNDC3AQ59EK9 446 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 VWA2Q5GFL6 755 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 FAM69BQ5VUD6 431 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 DLEU7Q6UYE1 221 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 BNC2Q6ZN30 1099 aaPredicted RBP11.62□□□□□ -0.55
TPM1-209ENST00000558072 RETREG3Q86VR2 466 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 ANKRD46Q86W74 232 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 SLC30A8Q8IWU4 369 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 C10orf67Q8IYJ2 551 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 MORN4Q8NDC4 146 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 ELP4Q96EB1 424 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 ECSITQ9BQ95 431 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 SLC35A5Q9BS91 424 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 THUMPD3Q9BV44 507 aaKnown RBP11.62□□□□□ -0.55
TPM1-209ENST00000558072 RBCK1Q9BYM8 510 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 VN1R1Q9GZP7 353 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 PAIP1Q9H074 479 aaKnown RBP11.62□□□□□ -0.55
TPM1-209ENST00000558072 AKIRIN1Q9H9L7 192 aaPredicted RBP11.62□□□□□ -0.55
TPM1-209ENST00000558072 TPT1P8Q9HAU6 139 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 SERHLQ9NQF3 203 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 SLC22A11Q9NSA0 550 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 DDX18Q9NVP1 670 aaKnown RBP11.62□□□□□ -0.55
TPM1-209ENST00000558072 NTMQ9P121 344 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 C5AR2Q9P296 337 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 COPS7AQ9UBW8 275 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 PRODH2Q9UF12 536 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 PCDHB14Q9Y5E9 798 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 SNX8Q9Y5X2 465 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 AK5Q9Y6K8 562 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 CNOT1A5YKK6 2376 aaKnown RBP11.62□□□□□ -0.55
TPM1-209ENST00000558072 RNF103-CHMP3A0A140T963 221 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 MED19A0JLT2 244 aaPredicted RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 ASPDHA6ND91 283 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 PRKRAO75569 313 aaKnown RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 CDC123O75794 336 aaPredicted RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 ABCB1P08183 1280 aaPredicted RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 LIPCP11150 499 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 ICAM2P13598 275 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 OR4D2P58180 307 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 ERV3-1Q14264 604 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 ZNHIT3Q15649 155 aaPredicted RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 MPEG1Q2M385 716 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 NANOGP8Q6NSW7 305 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 ERICH5Q6P6B1 374 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 FAM198BQ6UWH4 519 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 ZNF551Q7Z340 670 aaPredicted RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 RAB43Q86YS6 212 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 OR4N5Q8IXE1 308 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 DEFB107AQ8IZN7 70 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 CLECL1Q8IZS7 167 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 MMP21Q8N119 569 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 VWA5B2Q8N398 1253 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 IL22RA1Q8N6P7 574 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 METTL25Q8N6Q8 603 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 SUN3Q8TAQ9 357 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 SLC7A6OSQ96CW6 309 aaPredicted RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 NEURL3Q96EH8 262 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 MS4A4EQ96PG1 132 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 SPSB2Q99619 263 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 LPAR4Q99677 370 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 GPATCH1Q9BRR8 931 aaKnown RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 MUC13Q9H3R2 512 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 NANOGQ9H9S0 305 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 CXorf21Q9HAI6 301 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 ZCCHC3Q9NUD5 404 aaKnown RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 GIN1Q9NXP7 522 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 ADA2Q9NZK5 511 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 CTSFQ9UBX1 484 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 FAF1Q9UNN5 650 aaPredicted RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 PTRH2Q9Y3E5 179 aaKnown RBP11.61□□□□□ -0.55
TPM1-209ENST00000558072 ZNF451Q9Y4E5 1061 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 NEUROG3Q9Y4Z2 214 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 PCDHGA6Q9Y5G7 932 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 SDK2Q58EX2 2172 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 DCHS1Q96JQ0 3298 aa11.61□□□□□ -0.55
TPM1-209ENST00000558072 ERICH4A6NGS2 130 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 OR6C76A6NM76 312 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 ASNA1O43681 348 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms