RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 GUCY1B2O75343 617 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 PRSS23O95084 383 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 KRT75O95678 551 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 LDLRP01130 860 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 SEMG1P04279 462 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 SLC35G6P0C7Q6 338 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 C8orf89P0DMQ9 161 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 ALPPL2P10696 532 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 UQCRBP14927 111 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 DDX5P17844 614 aaKnown RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 ALOX12P18054 663 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CDH3P22223 829 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CHI3L1P36222 383 aaPredicted RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 FEN1P39748 380 aaKnown RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 CRATP43155 626 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 DHPSP49366 369 aaPredicted RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 NCBP2P52298 156 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPG11-204ENST00000557866 LIM2P55344 173 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 OR1D5P58170 312 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 VSX2P58304 361 aaPredicted RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 RPS26P62854 115 aaKnown RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 OLR1P78380 273 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 FOLH1Q04609 750 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CSTF1Q05048 431 aaKnown RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 CHRNB3Q05901 458 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 VEZF1Q14119 521 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 MAP7Q14244 749 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CEBPEQ15744 281 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 MAPK11Q15759 364 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 PRTGQ2VWP7 1150 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 PLK5Q496M5 336 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 IQCCQ4KMZ1 466 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 FAM98BQ52LJ0 330 aaKnown RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 MANEAQ5SRI9 462 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 PPP4R4Q6NUP7 873 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 IRGCQ6NXR0 463 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 SLC48A1Q6P1K1 146 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 TBPL2Q6SJ96 375 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 FAM92BQ6ZTR7 304 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CBLL1Q75N03 491 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 EIF3MQ7L2H7 374 aaKnown RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 C6orf120Q7Z4R8 191 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 SPRED1Q7Z699 444 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 VTCN1Q7Z7D3 282 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 SLC35F3Q8IY50 421 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 EID3Q8N140 333 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 HORMAD2Q8N7B1 307 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 TRIML2Q8N7C3 387 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 C11orf65Q8NCR3 313 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CATSPER1Q8NEC5 780 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 NFKBIDQ8NI38 313 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 GAB3Q8WWW8 586 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 RERGQ96A58 199 aaPredicted RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 ZBED6CLQ96FA7 236 aaPredicted RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 SLC47A1Q96FL8 570 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 ZNF597Q96LX8 424 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 ZNF285Q96NJ3 590 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 BBS4Q96RK4 519 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 SERINC2Q96SA4 455 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CSF3RQ99062 836 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CIB1Q99828 191 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 RSPO3Q9BXY4 272 aaPredicted RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 UGT2B28Q9BY64 529 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 NLNQ9BYT8 704 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 TMEM38AQ9H6F2 299 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 MAGIXQ9H6Y5 334 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 EPHA6Q9UF33 1036 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 ZNF639Q9UID6 485 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CNOT11Q9UKZ1 510 aaKnown RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 OAZ3Q9UMX2 235 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 FAF1Q9UNN5 650 aaPredicted RBP6.94□□□□□ -1.3
SPG11-204ENST00000557866 CORO2BQ9UQ03 480 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 LRCH1Q9Y2L9 728 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 SNX8Q9Y5X2 465 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 CSNK1G3Q9Y6M4 447 aa6.94□□□□□ -1.3
SPG11-204ENST00000557866 ARHGEF17Q96PE2 2063 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 HEATR5BQ9P2D3 2071 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 IGHV5-51A0A0C4DH38 117 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 PRAMEF27A3QJZ7 478 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 RHPN2P1A8MT19 583 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 FAM227AF5H4B4 570 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 SGK494L7N484 410 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 CYR61O00622 381 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 ZSCAN9O15535 394 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 LAMTOR5O43504 91 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 B4GAT1O43505 415 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 B3GALT2O43825 422 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 GALR3O60755 368 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 ERAL1O75616 437 aaKnown RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 RASAL1O95294 804 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 NR2F6P10588 404 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 FOSL1P15407 271 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 CPN2P22792 545 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 AQP1P29972 269 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 NTSP30990 170 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 MAGEA2P43356 314 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 CCT3P49368 545 aaKnown RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 IST1P53990 364 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms