RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 KDM7AQ6ZMT4 941 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 Q6ZPA2 131 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 Q6ZRG5 221 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 ANO5Q75V66 913 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 FCRLAQ7L513 359 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 C5orf24Q7Z6I8 188 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 GPR137CQ8N3F9 429 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 Q8N3U1 123 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 PDCL2Q8N4E4 241 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 FAM89BQ8N5H3 189 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 ZNF321PQ8N8H1 164 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 SLC37A3Q8NCC5 494 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 C16orf52Q8NHV5 167 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 GPR148Q8TDV2 347 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 DNAJA4Q8WW22 397 aaPredicted RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 SMPDL3AQ92484 453 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 SMG7Q92540 1137 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 MCUR1Q96AQ8 359 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 SLC47A1Q96FL8 570 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 COQ2Q96H96 371 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 PCED1BQ96HM7 432 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 RPRD1AQ96P16 312 aaPredicted RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 RBM14Q96PK6 669 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 UHRF2Q96PU4 802 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 NEDD4LQ96PU5 975 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 ACCSQ96QU6 501 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 DCTN5Q9BTE1 182 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 POLR3CQ9BUI4 534 aaPredicted RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 SF3B5Q9BWJ5 86 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 CSTL1Q9H114 145 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 EGLN3Q9H6Z9 239 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 KCNK13Q9HB14 408 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 ADARB2Q9NS39 739 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 MED17Q9NVC6 651 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 PIPOXQ9P0Z9 390 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 RALYQ9UKM9 306 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 ELF5Q9UKW6 265 aaPredicted RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 GRID1Q9ULK0 1009 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 FZR1Q9UM11 496 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 RNF6Q9Y252 685 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 IFT52Q9Y366 437 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 RIPK3Q9Y572 518 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 FGD5Q6ZNL6 1462 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 CCDC7Q96M83 1385 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 A0A087WUV0 522 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 TTC26A0AVF1 554 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 SH3PXD2BA1X283 911 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 MTMR11A4FU01 709 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 TCP11X1B4DZS4 312 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 TCP10L2B9ZVM9 353 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 SPECC1L-ADORA2AF8WAN1 911 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 ALOX15BO15296 676 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 P2RX6O15547 441 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 KIAA0513O60268 411 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 RAMP2O60895 175 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 GLRA3O75311 464 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 CTAG2O75638 210 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 DFFBO76075 338 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 GLUD1P00367 558 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 PRSS2P07478 247 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 PABPC4LP0CB38 370 aaKnown RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 PRKAR1AP10644 381 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 FGF5P12034 268 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 CPN1P15169 458 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 CCKBRP32239 447 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 NF2P35240 595 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 MAGEA1P43355 309 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 GLUD2P49448 558 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 GAS1P54826 345 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 OR1D5P58170 312 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 BRWD1-AS2P59051 145 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 DCDC1P59894 354 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 RPS4XP62701 263 aaKnown RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 NOP14P78316 857 aaKnown RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 BNC1Q01954 994 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 GAGE5Q13069 117 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 GAGE6Q13070 117 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 KLF5Q13887 457 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 HNRNPDQ14103 355 aaKnown RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 GANABQ14697 944 aaKnown RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 CDKN3Q16667 212 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 LINC01620Q4KN68 170 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 XKR3Q5GH77 459 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 C10orf120Q5SQS8 335 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 DMKNQ6E0U4 476 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 TRIM65Q6PJ69 517 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 DOK6Q6PKX4 331 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 SPRED1Q7Z699 444 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 PIP4P1Q86T03 277 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 RANBP3LQ86VV4 465 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 CACUL1Q86Y37 369 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 TGIF2LXQ8IUE1 241 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 PYROXD2Q8N2H3 581 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 CENPSQ8N2Z9 138 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 TCEANCQ8N8B7 351 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 PRR26Q8N8Z3 221 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 ZNF114Q8NC26 417 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 SMRP1Q8NCR6 262 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 C8orf46Q8TAG6 207 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 CD99L2Q8TCZ2 262 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms