RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, human

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH11-211	ENST00000557726	RAB17	Q9H0T7	212 aa		11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	DDX31	Q9H8H2	851 aa	Known RBP	11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	IPPK	Q9H8X2	491 aa		11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	PROK2	Q9HC23	129 aa		11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	RYDEN	Q9NUL5	291 aa	Known RBP	11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	CPSF2	Q9P2I0	782 aa	Known RBP	11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	CNOT11	Q9UKZ1	510 aa	Known RBP	11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	TSC22D4	Q9Y3Q8	395 aa		11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	ASB4	Q9Y574	426 aa		11.74	□□□□□ -0.53
RDH11-211	ENST00000557726	ABCA4	P78363	2273 aa		11.74	□□□□□ -0.53
RDH11-211	ENST00000557726		A0A0A6YYD5	115 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	AHRR	A9YTQ3	701 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726		H0YIV9	168 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	DVL2	O14641	736 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	UGDH	O60701	494 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	CTAG2	O75638	210 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	AIFM1	O95831	613 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	GBA	P04062	536 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	C2	P06681	752 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	SLC35E2	P0CK97	266 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	BMP5	P22003	454 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	SSTR4	P31391	388 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	PEX19	P40855	299 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	PIK3CG	P48736	1102 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	MASP1	P48740	699 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	TMED10	P49755	219 aa	Known RBP	11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	NEK2	P51955	445 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	NRG3	P56975	720 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	DUSP8	Q13202	625 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	CUL3	Q13618	768 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	ACAP2	Q15057	778 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	RPS6KA2	Q15349	733 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	TOMM20	Q15388	145 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	OR52E8	Q6IFG1	317 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	MRM1	Q6IN84	353 aa	Known RBP	11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	GOLGA7	Q7Z5G4	137 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	GALNT12	Q8IXK2	581 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	ANP32B	Q92688	251 aa	Known RBP	11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	SERPINI1	Q99574	410 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	GPATCH1	Q9BRR8	931 aa	Known RBP	11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	ZNF717	Q9BY31	904 aa	Predicted RBP	11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	SNX15	Q9NRS6	342 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	PYCARD	Q9ULZ3	195 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	EDAR	Q9UNE0	448 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	RNF11	Q9Y3C5	154 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	PCDHGB3	Q9Y5G1	929 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	TNPO3	Q9Y5L0	923 aa	Known RBP	11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	NPFFR2	Q9Y5X5	522 aa		11.73	□□□□□ -0.53
RDH11-211	ENST00000557726	AKAP9	Q99996	3911 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726		A0A096LPK6	155 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CCDC189	A1A4V9	331 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	ANKRD33B	A6NCL7	494 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	SYT5	O00445	386 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	PGRMC2	O15173	223 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	TRIM3	O75382	744 aa	Predicted RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	KLHL2	O95198	593 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CLDN9	O95484	217 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	ACSL3	O95573	720 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	IL2RA	P01589	272 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CD99	P14209	185 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	KRT15	P19012	456 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	TYK2	P29597	1187 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	GALNS	P34059	522 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	ASCL1	P50553	236 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CCNG1	P51959	295 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	FBXW4	P57775	412 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	RPP38	P78345	283 aa	Known RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	ACSF3	Q4G176	576 aa	Predicted RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	FBXW10	Q5XX13	1052 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	BICRAL	Q6AI39	1079 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	TTC19	Q6DKK2	380 aa	Predicted RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	PACS2	Q86VP3	889 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	PM20D2	Q8IYS1	436 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CHDH	Q8NE62	594 aa	Predicted RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	TNIP2	Q8NFZ5	429 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	OR4K14	Q8NGD5	310 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	UCN3	Q969E3	161 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	TP53INP1	Q96A56	240 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	RMND5B	Q96G75	393 aa	Predicted RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	RILP	Q96NA2	401 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	VPS11	Q9H270	941 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CXorf21	Q9HAI6	301 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	PSD3	Q9NYI0	1048 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CRIM1	Q9NZV1	1036 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	MTRF1L	Q9UGC7	380 aa	Known RBP	11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	CAMK2A	Q9UQM7	478 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726	EXPH5	Q8NEV8	1989 aa		11.72	□□□□□ -0.53
RDH11-211	ENST00000557726		A0A1W2PS29	197 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	FOXE1	O00358	373 aa	Predicted RBP	11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	SNX4	O95219	450 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	SIX3	O95343	332 aa	Predicted RBP	11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	EPPIN	O95925	133 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	CLPS	P04118	112 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	NT5E	P21589	574 aa		11.71	□□□□□ -0.53

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