RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 NEFHP12036 1026 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 CD1EP15812 388 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 CHN1P15882 459 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 NME2P22392 152 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 SERPINB3P29508 390 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 HNRNPFP52597 415 aaKnown RBP15.46■□□□□ 0.07
NEK9-211ENST00000557673 LIM2P55344 173 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 RAB38P57729 211 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 KRTAP10-9P60411 292 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 HMGCS1Q01581 520 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 TMEM211Q6ICI0 200 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 SCIMPQ6UWF3 145 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 COMMD6Q7Z4G1 85 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 METTL4Q8N3J2 472 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 KIF2BQ8N4N8 673 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 TMEM52Q8NDY8 209 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 ELP5Q8TE02 316 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 TWIST2Q8WVJ9 160 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 DMRTA2Q96SC8 542 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 CSF3RQ99062 836 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 SORT1Q99523 831 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 C20orf27Q9GZN8 174 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 DDX31Q9H8H2 851 aaKnown RBP15.46■□□□□ 0.07
NEK9-211ENST00000557673 ZNF395Q9H8N7 513 aaPredicted RBP15.46■□□□□ 0.07
NEK9-211ENST00000557673 LYRM4Q9HD34 91 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 VPS29Q9UBQ0 182 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 HAO1Q9UJM8 370 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 DAPP1Q9UN19 280 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 DNAJC15Q9Y5T4 150 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 PTGDR2Q9Y5Y4 395 aa15.46■□□□□ 0.07
NEK9-211ENST00000557673 MED13LQ71F56 2210 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 A8MUA0 341 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 FCHO1O14526 889 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 DYNC1I1O14576 645 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 TMPRSS11DO60235 418 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 SNUPNO95149 360 aaKnown RBP15.45■□□□□ 0.06
NEK9-211ENST00000557673 CHEK2O96017 543 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 SLC1A6P48664 564 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 STX3Q13277 289 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 UGT3A2Q3SY77 523 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 TRIM46Q7Z4K8 759 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 TRIM42Q8IWZ5 723 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 ZNF781Q8N8C0 355 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 FAM47BQ8NA70 645 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 ASB5Q8WWX0 329 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 TREX2Q9BQ50 279 aaPredicted RBP15.45■□□□□ 0.06
NEK9-211ENST00000557673 TUBB1Q9H4B7 451 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 TRIM45Q9H8W5 580 aaPredicted RBP15.45■□□□□ 0.06
NEK9-211ENST00000557673 MED4Q9NPJ6 270 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 NMRK1Q9NWW6 199 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 ZDHHC2Q9UIJ5 367 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 ADAM29Q9UKF5 820 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 TRAF6Q9Y4K3 522 aa15.45■□□□□ 0.06
NEK9-211ENST00000557673 GTF3C1Q12789 2109 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 SAGE2PA6NJ88 616 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 KLRC4-KLRK1H3BQV0 150 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 TGFBR3LH3BV60 316 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 ADAM10O14672 748 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 TFECO14948 347 aaPredicted RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 SNNO75324 88 aaPredicted RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 RSL1D1O76021 490 aaKnown RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 TPP2P29144 1249 aaPredicted RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 TRHRP34981 398 aaPredicted RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 PTGS2P35354 604 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 HLCSP50747 726 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 HNRNPH2P55795 449 aaKnown RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 HSF1Q00613 529 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 IMPG1Q17R60 797 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 KRTAP21-3Q3LHN1 58 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 SPIN4Q56A73 249 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 MRM1Q6IN84 353 aaKnown RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 C3P1Q6ZMU1 363 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 PAGE2Q7Z2X7 111 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 HOMEZQ8IX15 550 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 CLYBLQ8N0X4 340 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 CPSF7Q8N684 471 aaKnown RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 C1orf52Q8N6N3 182 aaKnown RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 MAPKAP1Q9BPZ7 522 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 PRTFDC1Q9NRG1 225 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 LYARQ9NX58 379 aaKnown RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 AHSPQ9NZD4 102 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 KCMF1Q9P0J7 381 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 PHF11Q9UIL8 331 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 KLF13Q9Y2Y9 288 aaPredicted RBP15.44■□□□□ 0.06
NEK9-211ENST00000557673 RAP2CQ9Y3L5 183 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 MMACHCQ9Y4U1 282 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 CCL27Q9Y4X3 112 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 CLDN16Q9Y5I7 305 aa15.44■□□□□ 0.06
NEK9-211ENST00000557673 NPIPB8E9PQR5 432 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 CYR61O00622 381 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 KLF11O14901 512 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 PIP5K1BO14986 540 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 GBAP04062 536 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 PRPH2P23942 346 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 PPP2R1BP30154 601 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 MLF1P58340 268 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 OCRLQ01968 901 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 TNFRSF17Q02223 184 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 ACSM2AQ08AH3 577 aa15.43■□□□□ 0.06
NEK9-211ENST00000557673 SLC13A2Q13183 592 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms