RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 COPS7BQ9H9Q2 264 aaPredicted RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 WASH6PQ9NQA3 447 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TM7SF3Q9NS93 570 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ATAD3AQ9NVI7 634 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 GEMIN8Q9NWZ8 242 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 FAM120CQ9NX05 1096 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 BTNL2Q9UIR0 455 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MCM8Q9UJA3 840 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MOSPD1Q9UJG1 213 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PCDHGB4Q9UN71 923 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 SNX7Q9UNH6 387 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CORO2BQ9UQ03 480 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MAN2B2Q9Y2E5 1009 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 DLGAP4Q9Y2H0 992 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 MRPS17Q9Y2R5 130 aaKnown RBP4.24□□□□□ -1.73
SRP54-212ENST00000556992 DTNAQ9Y4J8 743 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 CFAP47Q6ZTR5 3102 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TCRBV21S2A2A0A5A6 115 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ARHGAP10A1A4S6 786 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ELOVL7A1L3X0 281 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 MAGEA13PA6NCF6 341 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 GABRR3A8MPY1 467 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PDZK1P1A8MUH7 402 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PRAMEF26H0Y7S4 382 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ARPC2O15144 300 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 AKAP10O43572 662 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 DENRO43583 198 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 DFNA5O60443 496 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 GUCY1B2O75343 617 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ZNF217O75362 1048 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 SEMA3DO95025 777 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CCNDBP1O95273 360 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 LDLRP01130 860 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 IGLV3-19P01714 112 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ANXA6P08133 673 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ABCB1P08183 1280 aaPredicted RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 ZCCHC18P0CG32 403 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ERGP11308 486 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 COX7A2P14406 83 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 UQCRBP14927 111 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 IL1RNP18510 177 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 GGT1P19440 569 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 HNRNPA2B1P22626 353 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 CTSSP25774 331 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 MAT2AP31153 395 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 TIA1P31483 386 aaKnown RBP eCLIP4.23□□□□□ -1.73
SRP54-212ENST00000556992 GSTM5P46439 218 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 RAB28P51157 221 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ZNF81P51508 661 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ARFIP1P53367 373 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ATXN3P54252 364 aaPredicted RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 PROK1P58294 105 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 RPS13P62277 151 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 BLOC1S1P78537 153 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 MRPS35P82673 323 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 FOLH1Q04609 750 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CHRNB3Q05901 458 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PRDX1Q06830 199 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 KLC1Q07866 573 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 SRSF4Q08170 494 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 MED21Q13503 144 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 NFATC4Q14934 902 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 RPE65Q16518 533 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CYP51A1Q16850 503 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 LRRC36Q1X8D7 754 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 GRAMD1BQ3KR37 738 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 FAM98BQ52LJ0 330 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 CT83Q5H943 113 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CCNYL2Q5T2Q4 361 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 DEPDC1Q5TB30 811 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 KHDRBS2Q5VWX1 349 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 FAM219BQ5XKK7 198 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 LPCAT4Q643R3 524 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PPP4R4Q6NUP7 873 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 IRGCQ6NXR0 463 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ERICH5Q6P6B1 374 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ENPP7Q6UWV6 458 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 KIAA1324Q6UXG2 1013 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 ZBTB49Q6ZSB9 765 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ZNF621Q6ZSS3 439 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PAGE2Q7Z2X7 111 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CAMKMTQ7Z624 323 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 TMPRSS11BQ86T26 416 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 SERPINA11Q86U17 422 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CACUL1Q86Y37 369 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 APLFQ8IW19 511 aaPredicted RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 EID3Q8N140 333 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 METTL4Q8N3J2 472 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 C1orf52Q8N6N3 182 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 TRIML2Q8N7C3 387 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 OR2T12Q8NG77 320 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 OR2L8Q8NGY9 312 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CLHC1Q8NHS4 586 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 RPLP0P6Q8NHW5 317 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CANT1Q8WVQ1 401 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 DDB2Q92466 427 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 SNX19Q92543 992 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 RGMAQ96B86 450 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 SLCO4A1Q96BD0 722 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms