RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 CNOT11Q9UKZ1 510 aaKnown RBP16.21■□□□□ 0.19
SDR39U1-219ENST00000556523 NCKAP5O14513 1909 aa16.21■□□□□ 0.19
SDR39U1-219ENST00000556523 ZFHX3Q15911 3703 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 NINQ8N4C6 2090 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 ESYT3A0FGR9 886 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 GPR75O95800 540 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 SLC35E2BP0CK96 405 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 GMPRP36959 345 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 MASP1P48740 699 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 TMED10P49755 219 aaKnown RBP16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 ARFIP1P53367 373 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 SLC37A1P57057 533 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 RPS13P62277 151 aaKnown RBP16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 PCDH1Q08174 1060 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 NTRK2Q16620 822 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 ACSF3Q4G176 576 aaPredicted RBP16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 FLYWCH1Q4VC44 716 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 C6orf163Q5TEZ5 329 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 FBXW10Q5XX13 1052 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 HLA-DQA1Q5Y7H0 255 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 CYS1Q717R9 158 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 ISCA2Q86U28 154 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 TGIF2LYQ8IUE0 185 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 RELL2Q8NC24 303 aaPredicted RBP16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 HSPBAP1Q96EW2 488 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 TMUB1Q9BVT8 246 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 CXXC4Q9H2H0 198 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 SNX15Q9NRS6 342 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 RASSF1Q9NS23 344 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 ZDHHC18Q9NUE0 388 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 CRIM1Q9NZV1 1036 aa16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 PRRC2AP48634 2157 aaKnown RBP16.2■□□□□ 0.18
SDR39U1-219ENST00000556523 GLOD5A6NK44 160 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 AHRRA9YTQ3 701 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 TRAPPC6AO75865 159 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 GFAPP14136 432 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 PTX3P26022 381 aaPredicted RBP16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 STX2P32856 288 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 RPP38P78345 283 aaKnown RBP16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 DLG1Q12959 904 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 RPS6KA2Q15349 733 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 SF3B4Q15427 424 aaKnown RBP eCLIP16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 KBTBD12Q3ZCT8 623 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 LIPJQ5W064 366 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 LACC1Q8IV20 430 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 IFT20Q8IY31 132 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 PM20D2Q8IYS1 436 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 FAM222BQ8WU58 562 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 RNASE6Q93091 150 aaKnown RBP16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 POM121Q96HA1 1249 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 TSPYL1Q9H0U9 437 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 PROK2Q9HC23 129 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 ZNF358Q9NW07 568 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 FOXD3Q9UJU5 478 aaPredicted RBP16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 PLEKHA6Q9Y2H5 1048 aa16.19■□□□□ 0.18
SDR39U1-219ENST00000556523 NF1P21359 2839 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 A0A0A6YYD5 115 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 C2orf92A0A1B0GVN3 265 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 A6NNC1 897 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 SYT5O00445 386 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 PROM1O43490 865 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 EEDO75530 441 aaKnown RBP16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 FAM155BO75949 473 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 AIFM1O95831 613 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 IL2RAP01589 272 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 FAM58BPP0C7Q3 252 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 KLK2P20151 261 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 GALNSP34059 522 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 ARL1P40616 181 aaPredicted RBP16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 DGKQP52824 942 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 NRG3P56975 720 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 GPX6P59796 221 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 DUSP8Q13202 625 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 NAB1Q13506 487 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 SETDB1Q15047 1291 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 OR52E8Q6IFG1 317 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 SEM1Q6ZVN7 128 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 CCDC25Q86WR0 208 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 NUDT13Q86X67 352 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 LRRN4CLQ8ND94 238 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 SH3GL2Q99962 352 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 ACOT9Q9Y305 439 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 TSC22D4Q9Y3Q8 395 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 FREM3P0C091 2139 aa16.18■□□□□ 0.18
SDR39U1-219ENST00000556523 ANKRD33BA6NCL7 494 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 TMPRSS11DO60235 418 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 UGDHO60701 494 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 TRIM3O75382 744 aaPredicted RBP16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 SLU7O95391 586 aaKnown RBP16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 EPPINO95925 133 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 C1QAP02745 245 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 SLC35E2P0CK97 266 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 KRT15P19012 456 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 PIK3CGP48736 1102 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 CRYZQ08257 329 aaKnown RBP16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 TOMM20Q15388 145 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 CPSF6Q16630 551 aaKnown RBP eCLIP16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 FAM83EQ2M2I3 478 aa16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 MRM1Q6IN84 353 aaKnown RBP16.17■□□□□ 0.18
SDR39U1-219ENST00000556523 TMEM64Q6YI46 380 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms