RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 ZNF441Q8N8Z8 693 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 NAXEQ8NCW5 288 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 OR52B6Q8NGF0 335 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 ART5Q96L15 291 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 TEX10Q9NXF1 929 aaPredicted RBP12.2□□□□□ -0.46
TGFB3-204ENST00000556285 BOKQ9UMX3 212 aaPredicted RBP12.2□□□□□ -0.46
TGFB3-204ENST00000556285 PCDHGA11Q9Y5H2 935 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 DYRK3O43781 588 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 TRIM3O75382 744 aaPredicted RBP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 KLHL2O95198 593 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 HOXB4P17483 251 aaPredicted RBP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 BUD31P41223 144 aaPredicted RBP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 FBXW4P57775 412 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 BIKQ13323 160 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 CUL3Q13618 768 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 ACAP2Q15057 778 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 PCBP2Q15366 365 aaKnown RBP eCLIP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 NTRK2Q16620 822 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 FAM83EQ2M2I3 478 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 CES4AQ5XG92 561 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 CYP20A1Q6UW02 462 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 RPS27LQ71UM5 84 aaKnown RBP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 ZZZ3Q8IYH5 903 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 ULK2Q8IYT8 1036 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 PRR22Q8IZ63 422 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 CLYBLQ8N0X4 340 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 L3MBTL4Q8NA19 623 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 NSUN5Q96P11 429 aaKnown RBP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 CENPKQ9BS16 269 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 DOHHQ9BU89 302 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 RAB17Q9H0T7 212 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 CXorf21Q9HAI6 301 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 ACKR4Q9NPB9 350 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 LYARQ9NX58 379 aaKnown RBP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 CNIH4Q9P003 139 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 MED12Q93074 2177 aa12.19□□□□□ -0.46
TGFB3-204ENST00000556285 MAP1AP78559 2803 aaPredicted RBP12.19□□□□□ -0.46
TGFB3-204ENST00000556285 MPDZO75970 2070 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 A0A1B0GTL3 188 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 C2orf92A0A1B0GVN3 265 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 FOXE1O00358 373 aaPredicted RBP12.18□□□□□ -0.46
TGFB3-204ENST00000556285 UGDHO60701 494 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 ACSL3O95573 720 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 SLC35E2P0CK97 266 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 GDF1P27539 372 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 SERPINB3P29508 390 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 CASQ1P31415 396 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 ARFIP1P53367 373 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 DUSP8Q13202 625 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 TECRLQ5HYJ1 363 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 RIPPLY2Q5TAB7 128 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 FNDC7Q5VTL7 733 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 DESI1Q6ICB0 168 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 ARSKQ6UWY0 536 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 SYT10Q6XYQ8 523 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 NUDT13Q86X67 352 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 MMP21Q8N119 569 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 ZNF615Q8N8J6 731 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 PTGR2Q8N8N7 351 aaPredicted RBP12.18□□□□□ -0.46
TGFB3-204ENST00000556285 RELL2Q8NC24 303 aaPredicted RBP12.18□□□□□ -0.46
TGFB3-204ENST00000556285 TNIP2Q8NFZ5 429 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 DIO2Q92813 273 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 REPS1Q96D71 796 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 PHF21BQ96EK2 531 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 PELOQ9BRX2 385 aaKnown RBP12.18□□□□□ -0.46
TGFB3-204ENST00000556285 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 MRPL1Q9BYD6 325 aaKnown RBP12.18□□□□□ -0.46
TGFB3-204ENST00000556285 VPS11Q9H270 941 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 NOL11Q9H8H0 719 aaKnown RBP12.18□□□□□ -0.46
TGFB3-204ENST00000556285 ZDHHC18Q9NUE0 388 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 DTX4Q9Y2E6 619 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 ACANP16112 2415 aa12.18□□□□□ -0.46
TGFB3-204ENST00000556285 ANKHD1Q8IWZ3 2542 aaKnown RBP12.17□□□□□ -0.46
TGFB3-204ENST00000556285 C15orf38-AP3S2A0A0A6YYH1 394 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 OR6C76A6NM76 312 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 ZWINTO95229 277 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 CLDN9O95484 217 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 KLK1P06870 262 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 GABRA1P14867 456 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 TYK2P29597 1187 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 GALNSP34059 522 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 PHEXP78562 749 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 CRYZQ08257 329 aaKnown RBP12.17□□□□□ -0.46
TGFB3-204ENST00000556285 SLC25A35Q3KQZ1 300 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 SGO1Q5FBB7 561 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 OR52E8Q6IFG1 317 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 LIX1Q8N485 282 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 SIMC1Q8NDZ2 872 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 C7orf57Q8NEG2 295 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 SPPL2AQ8TCT8 520 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 ADIPOR1Q96A54 375 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 ZNF597Q96LX8 424 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 RILPQ96NA2 401 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 GNRHR2Q96P88 292 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 TIMP4Q99727 224 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 LRRC1Q9BTT6 524 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 ZBTB26Q9HCK0 441 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 FARSBQ9NSD9 589 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms