RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 SCN10AQ9Y5Y9 1956 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 NPIPA5A0A0B4J1W7 369 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 NPIPA7E9PJI5 369 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 GFYI3L273 518 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 BTN3A3O00478 584 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 ENTPD6O75354 484 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 PTHP01270 115 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 FCER2P06734 321 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 NPIPA8P0DM63 369 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 PGDP52209 483 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 SMIM11AP58511 58 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 PRR5P85299 388 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 PROX2Q3B8N5 592 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 FAM78AQ5JUQ0 283 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 ATAT1Q5SQI0 421 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 HENMT1Q5T8I9 393 aaKnown RBP14.11□□□□□ -0.15
CUX1-215ENST00000556210 C22orf42Q6IC83 251 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 PTOV1Q86YD1 416 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 ENTHD1Q8IYW4 607 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 OR10H4Q8NGA5 316 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 WFIKKN2Q8TEU8 576 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 KLHL6Q8WZ60 621 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 AKIP1Q9NQ31 210 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 PCDHGB6Q9Y5F9 930 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 PCM1Q15154 2024 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 UPK1AO00322 258 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 FGF19O95750 216 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 UQCRC2P22695 453 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 CERS1P27544 350 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 SLC6A12P48065 614 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 SCN1BQ07699 218 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 TBRG1Q3YBR2 411 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 SIPA1Q96FS4 1042 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 PAQR5Q9NXK6 330 aaPredicted RBP14.11□□□□□ -0.15
CUX1-215ENST00000556210 RPS6KB2Q9UBS0 482 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 BTNL2Q9UIR0 455 aa14.11□□□□□ -0.15
CUX1-215ENST00000556210 TDRD15B5MCY1 1934 aaKnown RBP14.1□□□□□ -0.15
CUX1-215ENST00000556210 CLCA1A8K7I4 914 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 SLCO2B1O94956 709 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 FHP07954 510 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 MRPL3P09001 348 aaKnown RBP14.1□□□□□ -0.15
CUX1-215ENST00000556210 GPX2P18283 190 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 CELP19835 753 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 CMPK1P30085 196 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 MPIP34949 423 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 KCNC4Q03721 635 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 IL18Q14116 193 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 KLHDC8AQ8IYD2 350 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 OR4K5Q8NGD3 323 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 GGHQ92820 318 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 ECHDC3Q96DC8 303 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 VMP1Q96GC9 406 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 C16orf58Q96GQ5 468 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 CCDC115Q96NT0 180 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 C1QTNF7Q9BXJ2 289 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 SP140LQ9H930 580 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 IL23AQ9NPF7 189 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 ENPP4Q9Y6X5 453 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 HMGN2P05204 90 aaKnown RBP14.1□□□□□ -0.15
CUX1-215ENST00000556210 INHBBP09529 407 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 IL1RNP18510 177 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 CBLP22681 906 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 IFNGR2P38484 337 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 ZFP36L2P47974 494 aaKnown RBP14.1□□□□□ -0.15
CUX1-215ENST00000556210 SELENBP1Q13228 472 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 MICAQ29983 383 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 ZXDCQ2QGD7 858 aaPredicted RBP14.1□□□□□ -0.15
CUX1-215ENST00000556210 DPPA4Q7L190 304 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 TAF8Q7Z7C8 310 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 SLC38A5Q8WUX1 472 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 BCL7BQ9BQE9 202 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 CENPOQ9BU64 300 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 BHLHE41Q9C0J9 482 aaPredicted RBP14.1□□□□□ -0.15
CUX1-215ENST00000556210 ANKHQ9HCJ1 492 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 SOHLH2Q9NX45 425 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 NKIRAS2Q9NYR9 191 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 A0A1B0GVC2 190 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 A6NIN4 97 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 SLC35G6P0C7Q6 338 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 PRG2P13727 222 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 ITGA1P56199 1179 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 CCNJQ5T5M9 372 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 SLC16A12Q6ZSM3 486 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 FAM92BQ6ZTR7 304 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 LYSMD2Q8IV50 215 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 METTL4Q8N3J2 472 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 FAM46DQ8NEK8 389 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 OR51A7Q8NH64 312 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 SMARCD2Q92925 531 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 MCCC1Q96RQ3 725 aaPredicted RBP14.1□□□□□ -0.15
CUX1-215ENST00000556210 HDHD5Q9BXW7 423 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 BOLA1Q9Y3E2 137 aa14.1□□□□□ -0.15
CUX1-215ENST00000556210 KMOO15229 486 aa14.09□□□□□ -0.15
CUX1-215ENST00000556210 CAV3P56539 151 aa14.09□□□□□ -0.15
CUX1-215ENST00000556210 CST6Q15828 149 aa14.09□□□□□ -0.15
CUX1-215ENST00000556210 DEFB110Q30KQ9 67 aa14.09□□□□□ -0.15
CUX1-215ENST00000556210 FCRLBQ6BAA4 426 aa14.09□□□□□ -0.15
CUX1-215ENST00000556210 TANGO2Q6ICL3 276 aa14.09□□□□□ -0.15
CUX1-215ENST00000556210 FIGNL1Q6PIW4 674 aa14.09□□□□□ -0.15
CUX1-215ENST00000556210 CELF2-AS1Q8N7Q2 184 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms