RNA–Protein interactions for RNA: ENST00000555568.5

NSFL1C-212, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-212ENST00000555568 TRIM3O75382 744 aaPredicted RBP16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 TRAPPC6AO75865 159 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 GBAP04062 536 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 SLC35E2P0CK97 266 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 CD99P14209 185 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 SSTR4P31391 388 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 ARL1P40616 181 aaPredicted RBP16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 PEX19P40855 299 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 ASCL1P50553 236 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 ALDH18A1P54886 795 aaKnown RBP16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 WNT3P56703 355 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 CAV1Q03135 178 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 CUL3Q13618 768 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 GTF2H2Q13888 395 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 ACSF3Q4G176 576 aaPredicted RBP16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 OR52E8Q6IFG1 317 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 GTF2H2CQ6P1K8 395 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 GOLGA7Q7Z5G4 137 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 RHEBL1Q8TAI7 183 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 FBXO25Q8TCJ0 367 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 NINJ1Q92982 152 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 UCN3Q969E3 161 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 MRRFQ96E11 262 aaKnown RBP16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 LRRC46Q96FV0 321 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 FOXC2Q99958 501 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 CLEC4MQ9H2X3 399 aaPredicted RBP16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 IPPKQ9H8X2 491 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 CRIM1Q9NZV1 1036 aa16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 CPSF2Q9P2I0 782 aaKnown RBP16.54■□□□□ 0.24
NSFL1C-212ENST00000555568 ANKRD33BA6NCL7 494 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 DVL2O14641 736 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 C2P06681 752 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 PIK3R1P27986 724 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 GALNSP34059 522 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 PIK3CGP48736 1102 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 MASP1P48740 699 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 NEK2P51955 445 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 FBXW4P57775 412 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 CRYZQ08257 329 aaKnown RBP16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 MROH9Q5TGP6 573 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 BICRALQ6AI39 1079 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 KLC3Q6P597 504 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 CCDC91Q7Z6B0 441 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 GALNT12Q8IXK2 581 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 ZNF441Q8N8Z8 693 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 NAXEQ8NCW5 288 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 CHDHQ8NE62 594 aaPredicted RBP16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 TNIP2Q8NFZ5 429 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 RMND5BQ96G75 393 aaPredicted RBP16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 RILPQ96NA2 401 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 RAB17Q9H0T7 212 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 LIME1Q9H400 295 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 SNX15Q9NRS6 342 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 ZNF358Q9NW07 568 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 ST6GALNAC2Q9UJ37 374 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 PYCARDQ9ULZ3 195 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 RNF11Q9Y3C5 154 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 ARHGAP21Q5T5U3 1957 aa16.53■□□□□ 0.24
NSFL1C-212ENST00000555568 A0A1W2PS29 197 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 CCDC189A1A4V9 331 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 AHRRA9YTQ3 701 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 KDM4EB2RXH2 506 aaPredicted RBP16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 SYT5O00445 386 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 TMED10P49755 219 aaKnown RBP16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 NRG3P56975 720 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 PCBP2Q15366 365 aaKnown RBP eCLIP16.52■□□□□ 0.245e-7■■■■■ 27.5
NSFL1C-212ENST00000555568 TOMM20Q15388 145 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 CEBPEQ15744 281 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 UAP1Q16222 522 aaPredicted RBP16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 C6orf163Q5TEZ5 329 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 LACC1Q8IV20 430 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 WDR20Q8TBZ3 569 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 SPPL2AQ8TCT8 520 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 TP53INP1Q96A56 240 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 TIMP4Q99727 224 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 SH3GL2Q99962 352 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 CXXC4Q9H2H0 198 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 CXorf21Q9HAI6 301 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 RASSF1Q9NS23 344 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 TEX10Q9NXF1 929 aaPredicted RBP16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 MTRF1LQ9UGC7 380 aaKnown RBP16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 TNPO3Q9Y5L0 923 aaKnown RBP16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 NPFFR2Q9Y5X5 522 aa16.52■□□□□ 0.24
NSFL1C-212ENST00000555568 A0A096LPK6 155 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 FOXE1O00358 373 aaPredicted RBP16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 PGRMC2O15173 223 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 KLHL2O95198 593 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 SIX3O95343 332 aaPredicted RBP16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 EPPINO95925 133 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 CT62P0C5K7 136 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 CDK9P50750 372 aaKnown RBP16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 ACAP2Q15057 778 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 FLYWCH1Q4VC44 716 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 ZDHHC24Q6UX98 284 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 PACS2Q86VP3 889 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 PM20D2Q8IYS1 436 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 PRR22Q8IZ63 422 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 L3MBTL4Q8NA19 623 aa16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 GOT1L1Q8NHS2 421 aaPredicted RBP16.51■□□□□ 0.23
NSFL1C-212ENST00000555568 RNASE6Q93091 150 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms