RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DUSP11O75319 330 aaKnown RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 FRAT2O75474 233 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 TGFAP01135 160 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF883P0CG24 379 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 RALAP11233 206 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 CCNA2P20248 432 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF10P21506 573 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 TMOD1P28289 359 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 MATKP42679 507 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 MAGEA4P43358 317 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 SLC6A8P48029 635 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 GMFBP60983 142 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 RPS4XP62701 263 aaKnown RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 MYBPC1Q00872 1141 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 BTG3Q14201 252 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 EMC2Q15006 297 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 CLPPQ16740 277 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 AGAP7PQ5VUJ5 663 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 FAM159AQ6UWV7 190 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 PHC2Q8IXK0 858 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 CHDHQ8NE62 594 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 CHPT1Q8WUD6 406 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 PHYHIPQ92561 330 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 TMEM45BQ96B21 275 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF689Q96CS4 500 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 RBM4BQ9BQ04 359 aaKnown RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 FAM124BQ9H5Z6 455 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 NT5DC2Q9H857 520 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 CTSZQ9UBR2 303 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 LHX3Q9UBR4 397 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 NUDCQ9Y266 331 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 SLC6A5Q9Y345 797 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 MOB4Q9Y3A3 225 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 HMGXB3Q12766 1538 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 AFF2P51816 1311 aa4.44□□□□□ -1.7
CKS1BP1-201ENST00000555221 SMARCA4P51532 1647 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 IGKV3D-15A0A087WSY6 115 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 RNF212BA8MTL3 300 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 CFLARO15519 480 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 BUB1O43683 1085 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 IGHG1P01857 330 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 GSTA1P08263 222 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 CALML3P27482 149 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 AKT2P31751 481 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 NPY2RP49146 381 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 VEGFCP49767 419 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 SNX1Q13596 522 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 INAQ16352 499 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 HKDC1Q2TB90 917 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF440Q8IYI8 595 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 RNF148Q8N7C7 305 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 SAMD12Q8N8I0 201 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 BEST4Q8NFU0 473 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 OR56B1Q8NGI3 324 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 OR4F5Q8NH21 305 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 DQX1Q8TE96 717 aaKnown RBP4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 SSC4DQ8WTU2 575 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 ACCSQ96QU6 501 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 CABLES2Q9BTV7 478 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 NMNAT2Q9BZQ4 307 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 RAB17Q9H0T7 212 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 TMEM231Q9H6L2 316 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 Q9HAA7 133 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 CLIP2Q9UDT6 1046 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 CIDEBQ9UHD4 219 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF175Q9Y473 711 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 PDS5BQ9NTI5 1447 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 PEG3Q9GZU2 1588 aa4.43□□□□□ -1.7
CKS1BP1-201ENST00000555221 B3GALNT1O75752 331 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 OR9G9P0C7N8 305 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 GP9P14770 177 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 FOSL2P15408 326 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 HSPA1LP34931 641 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 SLC1A4P43007 532 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 SLC26A5P58743 744 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 GSTO1P78417 241 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 MS4A2Q01362 244 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 ENPP2Q13822 863 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 PDIA5Q14554 519 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 AGKQ53H12 422 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 STXBP4Q6ZWJ1 553 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 ADGRD2Q7Z7M1 963 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 ADCK1Q86TW2 530 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 RELL2Q8NC24 303 aaPredicted RBP4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 PTPRUQ92729 1446 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF597Q96LX8 424 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 DEFB118Q96PH6 123 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 HSD17B14Q9BPX1 270 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 C19orf43Q9BQ61 176 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 JPT2Q9H910 190 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 CNOT2Q9NZN8 540 aaKnown RBP4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 ACTR3BQ9P1U1 418 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 BCAP29Q9UHQ4 241 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF490Q9ULM2 529 aaPredicted RBP4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 SPATA2Q9UM82 520 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 CLCA3PQ9Y6N3 262 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZMYM6O95789 1325 aa4.42□□□□□ -1.7
CKS1BP1-201ENST00000555221 E9PQ18 207 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 SORBS2O94875 1100 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms