RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 TDRKHQ9Y2W6 561 aaKnown RBP10.56□□□□□ -0.72
SRP54-205ENST00000554803 KLK4Q9Y5K2 254 aa10.56□□□□□ -0.72
SRP54-205ENST00000554803 GPC6Q9Y625 555 aaPredicted RBP10.56□□□□□ -0.72
SRP54-205ENST00000554803 NF1P21359 2839 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 J3QRK9 145 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 FPGTO14772 594 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 FFAR3O14843 346 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 GPR42O15529 346 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 ZNF682O95780 498 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 GSTM1P09488 218 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 PSMB9P28065 219 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 S100A5P33763 92 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 GGT2P36268 569 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 ETV6P41212 452 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 CLK1P49759 484 aaKnown RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 CLK3P49761 638 aaKnown RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 DAPP51397 102 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 PHC1P78364 1004 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 HMGCS1Q01581 520 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 E2F2Q14209 437 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 INAQ16352 499 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 ZNF404Q494X3 552 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 TMEM52BQ4KMG9 183 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 CCDC92Q53HC0 331 aaPredicted RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 FBXO48Q5FWF7 155 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 LDLRAP1Q5SW96 308 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 GRHL2Q6ISB3 625 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 ERAP2Q6P179 960 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 PNCKQ6P2M8 343 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 LIPIQ6XZB0 460 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 GDPGP1Q6ZNW5 385 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 RAB11FIP2Q7L804 512 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 CYP4Z1Q86W10 505 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 NLRP8Q86W28 1048 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 ARMC8Q8IUR7 673 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 SLC22A18ASQ8N1D0 253 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 KRTCAP2Q8N6L1 136 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 C1orf52Q8N6N3 182 aaKnown RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 ATG16L2Q8NAA4 619 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 C11orf65Q8NCR3 313 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 GPR26Q8NDV2 337 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 GOT1L1Q8NHS2 421 aaPredicted RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 MCFD2Q8NI22 146 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 ASZ1Q8WWH4 475 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 TXNDC15Q96J42 360 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 BHLHE41Q9C0J9 482 aaPredicted RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 SLIRPQ9GZT3 109 aaKnown RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 FKBP14Q9NWM8 211 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 CNOT2Q9NZN8 540 aaKnown RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 PDP1Q9P0J1 537 aaPredicted RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 CD84Q9UIB8 345 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 VPS4AQ9UN37 437 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 WBP11Q9Y2W2 641 aaKnown RBP10.55□□□□□ -0.72
SRP54-205ENST00000554803 CORINQ9Y5Q5 1042 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 PEX16Q9Y5Y5 336 aa10.55□□□□□ -0.72
SRP54-205ENST00000554803 APCP25054 2843 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 CELSR1Q9NYQ6 3014 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 EFCAB10A6NFE3 127 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 IQCF5A8MTL0 148 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 EFCAB9A8MZ26 197 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 LOC110117498-PIK3R3F6TDL0 507 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 BOLA2-SMG1P6H3BVE0 249 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 RNASET2O00584 256 aaKnown RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 CASC3O15234 703 aaKnown RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 KDM1AO60341 852 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 MMP20O60882 483 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 UPK1BO75841 260 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 MED26O95402 600 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 MT-ND2P03891 347 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 RPLP0P05388 317 aaKnown RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 COX7A2P14406 83 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 CD36P16671 472 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 AGXTP21549 392 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 ELAVL4P26378 380 aaKnown RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 AKT2P31751 481 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 SOX6P35712 828 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 HALP42357 657 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 SPINT3P49223 89 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 ACSM2AQ08AH3 577 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 GTF2H3Q13889 308 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 CHRNA6Q15825 494 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 CPSF6Q16630 551 aaKnown RBP eCLIP10.54□□□□□ -0.72
SRP54-205ENST00000554803 PGS1Q32NB8 556 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 ADPRMQ3LIE5 342 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 ACSM2BQ68CK6 577 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 UNC5DQ6UXZ4 953 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 CCDC80Q76M96 950 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 ZNF367Q7RTV3 350 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 TMEM179BQ7Z7N9 219 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 ATCAYQ86WG3 371 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 DTX1Q86Y01 620 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 FBXO15Q8NCQ5 510 aaPredicted RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 PIK3R3Q92569 461 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 COQ10AQ96MF6 247 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 COL21A1Q96P44 957 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 MYOCQ99972 504 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 MAPKAP1Q9BPZ7 522 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 DOHHQ9BU89 302 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 CCDC32Q9BV29 185 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms