RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TMIGD1Q6UXZ0 262 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 CBLL1Q75N03 491 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 BTN2A1Q7KYR7 527 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 TSEN54Q7Z6J9 526 aaKnown RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 CCDC116Q8IYX3 515 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 SVBPQ8N300 66 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 RYBPQ8N488 228 aaPredicted RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 FBXO39Q8N4B4 442 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 NPWQ8N729 165 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 GPR26Q8NDV2 337 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 PROKR2Q8NFJ6 384 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 OR10G2Q8NGC3 310 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 TCEAL4Q96EI5 215 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 THAP7Q9BT49 309 aaPredicted RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 ADAT1Q9BUB4 502 aaKnown RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 WNT5BQ9H1J7 359 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 SLC25A32Q9H2D1 315 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 ZNF408Q9H9D4 720 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 AGO3Q9H9G7 860 aaKnown RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 IMP3Q9NV31 184 aaKnown RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 CLN6Q9NWW5 311 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 OR6C2Q9NZP2 312 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 ASH2LQ9UBL3 628 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 METTL1Q9UBP6 276 aaKnown RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 PCTPQ9UKL6 214 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 LHX6Q9UPM6 363 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 PCDHB7Q9Y5E2 793 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 TDRD15B5MCY1 1934 aaKnown RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 NYNRINQ9P2P1 1898 aaKnown RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 OR2M5A3KFT3 312 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TMEM200CA6NKL6 621 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 GABRR3A8MPY1 467 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SUPT3HB4E1H0 165 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 STK25O00506 426 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PRRG1O14668 218 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SLC19A2O60779 497 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PRAMEF2O60811 474 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 NBNO60934 754 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 RBBP9O75884 186 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 AQP8O94778 261 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TFP02787 698 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CBSLP0DN79 551 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PEPDP12955 493 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 ADCYAP1P18509 176 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 ELK1P19419 428 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PTPN6P29350 595 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CBSP35520 551 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 RAB5BP61020 215 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SIM1P81133 766 aaPredicted RBP9.07□□□□□ -0.96
SIX4-202ENST00000554079 CAP1Q01518 475 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SLC14A1Q13336 389 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 RAB33AQ14088 237 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PTGR1Q14914 329 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TMEM132BQ14DG7 1078 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SLC36A2Q495M3 483 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PLK5Q496M5 336 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 DGKKQ5KSL6 1271 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 GCNT6Q5T4J0 391 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 RAET1GQ6H3X3 334 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SLC27A1Q6PCB7 646 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SULF1Q8IWU6 871 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 LINC00116Q8NCU8 138 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 OR4C15Q8NGM1 316 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SPATA22Q8NHS9 363 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TMEM203Q969S6 136 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TMEM143Q96AN5 459 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 ORAI1Q96D31 301 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 MASTLQ96GX5 879 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SLC6A18Q96N87 628 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 VRK1Q99986 396 aaPredicted RBP9.07□□□□□ -0.96
SIX4-202ENST00000554079 C19orf43Q9BQ61 176 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 FICDQ9BVA6 458 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 NFKBIZQ9BYH8 718 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.07□□□□□ -0.96
SIX4-202ENST00000554079 SERHLQ9NQF3 203 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 NPDC1Q9NQX5 325 aaPredicted RBP9.07□□□□□ -0.96
SIX4-202ENST00000554079 ENAMQ9NRM1 1142 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 FTSJ1Q9UET6 329 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 EIF2B4Q9UI10 523 aaKnown RBP9.07□□□□□ -0.96
SIX4-202ENST00000554079 NEU3Q9UQ49 428 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SLC9A8Q9Y2E8 581 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 ZNF106Q9H2Y7 1883 aaKnown RBP9.07□□□□□ -0.96
SIX4-202ENST00000554079 ZNF831Q5JPB2 1677 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 ZAR1LA6NP61 321 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 WASH3PC4AMC7 463 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PPEF2O14830 753 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 LRRTM2O43300 516 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TXNL1O43396 289 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 KERAO60938 352 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 FZD7O75084 574 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 ENTPD6O75354 484 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 RECQL4O94761 1208 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SERPINA3P01011 423 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 IGHA2P01877 340 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 ALPIP09923 528 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PRG2P13727 222 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 GIFP27352 417 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 VIPR1P32241 457 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms