RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SIRT3Q9NTG7 399 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FAM118AQ9NWS6 357 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 HRASLS2Q9NWW9 162 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 TEX10Q9NXF1 929 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 NTMQ9P121 344 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 APOBEC3BQ9UH17 382 aaKnown RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FOXD3Q9UJU5 478 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CES1P1Q9UKY3 287 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CA5BQ9Y2D0 317 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SAMHD1Q9Y3Z3 626 aaKnown RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 FAM32AQ9Y421 112 aaKnown RBP6.9□□□□□ -1.3
ATXN3-221ENST00000553498 SNX8Q9Y5X2 465 aa6.9□□□□□ -1.3
ATXN3-221ENST00000553498 CKAP5Q14008 2032 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 CCDC163A0A0D9SF12 145 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 A0A0G2JPF8 293 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 LOC100130705A0A1B0GUX0 176 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 A0A1W2PR48 441 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 A0A1W2PR77 199 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HNRNPCL2B2RXH8 293 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HNRNPCL3B7ZW38 293 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 M0QX08 132 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF701M0R085 212 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TLR4O00206 839 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 PLOD2O00469 737 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 CASC3O15234 703 aaKnown RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 EMC8O43402 210 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HS6ST1O60243 411 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 GCM2O75603 506 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 SNAP29O95721 258 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 AIFM1O95831 613 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 MT-ND1P03886 318 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 IFNW1P05000 195 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TFAP2AP05549 437 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 LINGO3P0C6S8 592 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HNRNPCL4P0DMR1 293 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ALOX12P18054 663 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 POLR2CP19387 275 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 MAGP20916 626 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 IGFBP5P24593 272 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HOXA6P31267 233 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 PXNP49023 591 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HLCSP50747 726 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 NCBP2P52298 156 aaKnown RBP eCLIP6.89□□□□□ -1.315e-7■■■■□ 25.1
ATXN3-221ENST00000553498 CRISP3P54108 245 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 GABARAPL2P60520 117 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HNRNPKP61978 463 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 BTN3A2P78410 334 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 VLDLRP98155 873 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TEKQ02763 1124 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HHEXQ03014 270 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HSPB3Q12988 150 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 BIKQ13323 160 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 UBXN2BQ14CS0 331 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 IQCCQ4KMZ1 466 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 NKAPLQ5M9Q1 402 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 FCRL6Q6DN72 434 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 FAHD1Q6P587 224 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ZCCHC12Q6PEW1 402 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TBPL2Q6SJ96 375 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 C11orf74Q86VG3 221 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TSPYL5Q86VY4 417 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 C17orf82Q86X59 251 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 LGI4Q8N135 537 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 CACTIN-AS1Q8N1I8 211 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF786Q8N393 782 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 FAM46DQ8NEK8 389 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 FLCNQ8NFG4 579 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 OR4K14Q8NGD5 310 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 OR8K5Q8NH50 307 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 CCL4L1Q8NHW4 92 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 NFKBIDQ8NI38 313 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 SPPL2AQ8TCT8 520 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 UTP15Q8TED0 518 aaKnown RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 SLC38A5Q8WUX1 472 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 HDAC2Q92769 488 aaKnown RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 PROX1Q92786 737 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TANKQ92844 425 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF566Q969W8 418 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TAMM41Q96BW9 452 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TCTN2Q96GX1 697 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TPD52L3Q96J77 140 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 CNDP2Q96KP4 475 aaKnown RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 SLC35G5Q96KT7 338 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF300Q96RE9 604 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 CD180Q99467 661 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 PIP5K1AQ99755 562 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 APOL4Q9BPW4 351 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TUBA1CQ9BQE3 449 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ING2Q9H160 280 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TOR3AQ9H497 397 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 GLIPR2Q9H4G4 154 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 KLHL31Q9H511 634 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 EVA1AQ9H8M9 152 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ERVMER34-1Q9H9K5 563 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 SLAMF7Q9NQ25 335 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ZCCHC3Q9NUD5 404 aaKnown RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 EXD2Q9NVH0 621 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms