RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RPL3LQ92901 407 aaKnown RBP12.22□□□□□ -0.45
SHMT2-205ENST00000553474 EXOSC8Q96B26 276 aaKnown RBP12.22□□□□□ -0.45
SHMT2-205ENST00000553474 AMDHD1Q96NU7 426 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 KXD1Q9BQD3 176 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 SLC25A19Q9HC21 320 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 REV1Q9UBZ9 1251 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 CFL2Q9Y281 166 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 SLC17A4Q9Y2C5 497 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 IFT52Q9Y366 437 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 PCDHGA3Q9Y5H0 932 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 HEBP2Q9Y5Z4 205 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 STON1Q9Y6Q2 735 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 PNMA8CA0A1B0GUJ8 204 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 FEZF1A0PJY2 475 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 C2CD4DB7Z1M9 353 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 ANHXE9PGG2 379 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TLR4O00206 839 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 CCRL2O00421 344 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 MAN2B1O00754 1011 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TOR1BO14657 336 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 MID1O15344 667 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 SLC28A2O43868 658 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 UGT2B17O75795 530 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 LAMP2P13473 410 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 GADD45AP24522 165 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 ALDH4A1P30038 563 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 S100A5P33763 92 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 CNR2P34972 360 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 GPC1P35052 558 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 SOX6P35712 828 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 GSSP48637 474 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 PRKCDQ05655 676 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TP53BP2Q13625 1128 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 IRF4Q15306 451 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 MAPK11Q15759 364 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 SMAD2Q15796 467 aaKnown RBP12.21□□□□□ -0.45
SHMT2-205ENST00000553474 OCLNQ16625 522 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TMEM236Q5W0B7 351 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 C12orf73Q69YU5 71 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 CASP12Q6UXS9 341 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TRIM69Q86WT6 500 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TP53I13Q8NBR0 393 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-205ENST00000553474 OR56A1Q8NGH5 318 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 SUN3Q8TAQ9 357 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 FAM131CQ96AQ9 280 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 INSM2Q96T92 566 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-205ENST00000553474 FUZQ9BT04 418 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 DPH7Q9BTV6 452 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 C1QTNF2Q9BXJ5 285 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TMEM121BQ9BXQ6 578 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-205ENST00000553474 SP140LQ9H930 580 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 FBRSQ9HAH7 460 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TM7SF3Q9NS93 570 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 CHCHD3Q9NX63 227 aaKnown RBP12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TEX10Q9NXF1 929 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-205ENST00000553474 RPL36Q9Y3U8 105 aaKnown RBP12.21□□□□□ -0.45
SHMT2-205ENST00000553474 PEX16Q9Y5Y5 336 aa12.21□□□□□ -0.45
SHMT2-205ENST00000553474 CFAP20Q9Y6A4 193 aaKnown RBP12.21□□□□□ -0.45
SHMT2-205ENST00000553474 TICRRQ7Z2Z1 1910 aa12.21□□□□□ -0.46
SHMT2-205ENST00000553474 A0A0G2JPF8 293 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 TRBV4-1A0A0J9YWV2 114 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 HNRNPCL2B2RXH8 293 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 HNRNPCL3B7ZW38 293 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ZW10O43264 779 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ASNA1O43681 348 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 OR10H3O60404 316 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 PTHP01270 115 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 HNRNPCL4P0DMR1 293 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 NR2F1P10589 423 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 POU2F1P14859 743 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 GSTM3P21266 225 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 TGM1P22735 817 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 PSMB5P28074 263 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 TGM3Q08188 693 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 SGCGQ13326 291 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 KRR1Q13601 381 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 CYP27C1Q4G0S4 372 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 RPS26P11Q5JNZ5 115 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ZNF776Q68DI1 518 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 MRM1Q6IN84 353 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 VITQ6UXI7 678 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 PLEKHG7Q6ZR37 379 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 YAF2Q8IY57 180 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 HDDC3Q8N4P3 179 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 GALNT6Q8NCL4 622 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 SNRNP27Q8WVK2 155 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 KLHL6Q8WZ60 621 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 MGLLQ99685 303 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 PHF7Q9BWX1 381 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 BTBD1Q9H0C5 482 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 POLR2J3Q9H1A7 115 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 OR51I1Q9H343 314 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 GLIPR2Q9H4G4 154 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ZBTB20Q9HC78 741 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 AMBNQ9NP70 447 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 MRPS30Q9NP92 439 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ZCCHC3Q9NUD5 404 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 CALML5Q9NZT1 146 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms