RNA–Protein interactions for RNA: ENST00000551692.5

PACS2-211, Transcript of phosphofurin acidic cluster sorting protein 2, human

TSL 2

Gene PACS2, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACS2-211	ENST00000551692	PTGR1	Q14914	329 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	LARS2	Q15031	903 aa	Known RBP	13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	ARMC12	Q5T9G4	340 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	SAXO2	Q658L1	398 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	ELP2	Q6IA86	826 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	BLOC1S3	Q6QNY0	202 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	LINGO4	Q6UY18	593 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	STK40	Q8N2I9	435 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	MINDY1	Q8N5J2	469 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	GDPD1	Q8N9F7	314 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	OR2T35	Q8NGX2	323 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	GPR63	Q9BZJ6	419 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	QRSL1	Q9H0R6	528 aa	Known RBP	13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	SPNS1	Q9H2V7	528 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	MAGEL2	Q9UJ55	1249 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	PCDHA9	Q9Y5H5	950 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	E2F3	O00716	465 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	SCAMP1	O15126	338 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	RNGTT	O60942	597 aa	Known RBP	13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	PTP4A3	O75365	173 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	PRAMEF1	O95521	474 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	CSF3	P09919	207 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	UMPS	P11172	480 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	SLC2A4	P14672	509 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	TIMP2	P16035	220 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	FBXO43	Q4G163	708 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	LYPLAL1	Q5VWZ2	237 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	CILP2	Q8IUL8	1156 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	SPPL2A	Q8TCT8	520 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	HMGB4	Q8WW32	186 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	ADAT1	Q9BUB4	502 aa	Known RBP	13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	NDRG2	Q9UN36	371 aa	Known RBP	13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	NCKAP1	Q9Y2A7	1128 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	ASB4	Q9Y574	426 aa		13.14	□□□□□ -0.31
PACS2-211	ENST00000551692	NPHS1	O60500	1241 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	B3GALT4	O96024	378 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	RECQL	P46063	649 aa	Predicted RBP	13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	BCL2L1	Q07817	233 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	HYAL2	Q12891	473 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	EXOC3L2	Q2M3D2	409 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	MZT2B	Q6NZ67	158 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	CCDC36	Q8IYA8	594 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	PRSS16	Q9NQE7	514 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	NUDT15	Q9NV35	164 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	VAPA	Q9P0L0	249 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	NCR1	O76036	304 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	POU3F2	P20265	443 aa	Predicted RBP	13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	KCNJ3	P48549	501 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	GBX2	P52951	348 aa	Predicted RBP	13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	ZNF169	Q14929	603 aa	Predicted RBP	13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	P2RY14	Q15391	338 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	TEAD4	Q15561	434 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	GATAD2B	Q8WXI9	593 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	C12orf66	Q96MD2	445 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	CMSS1	Q9BQ75	279 aa	Known RBP	13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	SLC6A15	Q9H2J7	730 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	MEAF6	Q9HAF1	191 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	MAB21L2	Q9Y586	359 aa		13.13	□□□□□ -0.31
PACS2-211	ENST00000551692	PDCD5	O14737	125 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	ANKRD28	O15084	1053 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	S1PR4	O95977	384 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	PRNP	P04156	253 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	APOD	P05090	189 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	HOXC4	P09017	264 aa	Predicted RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	GDI1	P31150	447 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	RRAS2	P62070	204 aa	Predicted RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	TSPAN5	P62079	268 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	PTS	Q03393	145 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	PRKG2	Q13237	762 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	IL27RA	Q6UWB1	636 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	SYT14	Q8NB59	555 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	NPAS1	Q99742	590 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	P2RY13	Q9BPV8	354 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	SPON2	Q9BUD6	331 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	SAP130	Q9H0E3	1048 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	MRPL15	Q9P015	296 aa	Known RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	PRELID3B	Q9Y3B1	194 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	PCDHGB2	Q9Y5G2	931 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	NUMA1	Q14980	2115 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	SH3D21	A4FU49	640 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	CDK14	O94921	469 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	APOC1	P02654	83 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	APEH	P13798	732 aa	Known RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	RAB3A	P20336	220 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	LPO	P22079	712 aa	Predicted RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	FEN1	P39748	380 aa	Known RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	AVPR1B	P47901	424 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	AGTR2	P50052	363 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	POLR2L	P62875	67 aa	Known RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	TMIGD1	Q6UXZ0	262 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	TRMT11	Q7Z4G4	463 aa	Known RBP	13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	ENTHD1	Q8IYW4	607 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	OR11H4	Q8NGC9	324 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	OR5K1	Q8NHB7	308 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	MS4A12	Q9NXJ0	267 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	NPAP1	Q9NZP6	1156 aa		13.12	□□□□□ -0.31
PACS2-211	ENST00000551692	HECA	Q9UBI9	543 aa	Predicted RBP	13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms