RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 NRGNQ92686 78 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 RNASE6Q93091 150 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 SECISBP2Q96T21 854 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 DDX31Q9H8H2 851 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 RASSF1Q9NS23 344 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 ZNF629Q9UEG4 869 aaPredicted RBP21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 ST6GALNAC2Q9UJ37 374 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 CNOT11Q9UKZ1 510 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 ABCA4P78363 2273 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 HRKO00198 91 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 CDH16O75309 829 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 KRT15P19012 456 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 GCKP35557 465 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 TIMP3P35625 211 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 RPS6KA2Q15349 733 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 CPSF6Q16630 551 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 CCDC25Q86WR0 208 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 KIF18BQ86Y91 864 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 TGIF2LYQ8IUE0 185 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 NXNL1Q96CM4 212 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 GPATCH1Q9BRR8 931 aaKnown RBP21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 TMUB1Q9BVT8 246 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 CXXC4Q9H2H0 198 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 NPFFR2Q9Y5X5 522 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 MTORP42345 2549 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 FREM3P0C091 2139 aa21.19■□□□□ 0.98
SMARCD1-209ENST00000550477 LRRC3CA6NJW4 275 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 GLOD5A6NK44 160 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 DIAPH2O60879 1101 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 KRT38O76015 456 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 ARL1P40616 181 aaPredicted RBP21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 ALDH18A1P54886 795 aaKnown RBP21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 PLTPP55058 493 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 GPX6P59796 221 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 DLG1Q12959 904 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 SETDB1Q15047 1291 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 ACAP2Q15057 778 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 TOMM20Q15388 145 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 PFKFB4Q16877 469 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 FLYWCH1Q4VC44 716 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 OR52E8Q6IFG1 317 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 METTL2BQ6P1Q9 378 aaKnown RBP21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 DOK4Q8TEW6 326 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 ATP6V1E2Q96A05 226 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 RAB17Q9H0T7 212 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 KCNF1Q9H3M0 494 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 PROK2Q9HC23 129 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 AHSPQ9NZD4 102 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 CRIM1Q9NZV1 1036 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 ASB4Q9Y574 426 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 IKBKGQ9Y6K9 419 aa21.18■□□□□ 0.98
SMARCD1-209ENST00000550477 PRRC2AP48634 2157 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 AKAP6Q13023 2319 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 A0A0A6YYD5 115 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 A0A1W2PR48 441 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 FOXE1O00358 373 aaPredicted RBP21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 TRIM3O75382 744 aaPredicted RBP21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 PRKRAO75569 313 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 FAM155BO75949 473 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 MAGEA4P43358 317 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 DGKQP52824 942 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 MRPS25P82663 173 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 MRM1Q6IN84 353 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 CAMKMTQ7Z624 323 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 GALNT12Q8IXK2 581 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 RNF175Q8N4F7 328 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 FBF1Q8TES7 1133 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 SERPINI1Q99574 410 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 IPPKQ9H8X2 491 aa21.17■□□□□ 0.98
SMARCD1-209ENST00000550477 A6NNC1 897 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 CEACAM8P31997 349 aaPredicted RBP21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 BSGP35613 385 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 GTF2H2Q13888 395 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 PCBP2Q15366 365 aaKnown RBP eCLIP21.16■□□□□ 0.982e-7■■■■■ 30.9
SMARCD1-209ENST00000550477 CEBPEQ15744 281 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 FBXL19-AS1Q494R0 122 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 ACSF3Q4G176 576 aaPredicted RBP21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 GTF2H2CQ6P1K8 395 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 SPATA4Q8NEY3 305 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 OR4K14Q8NGD5 310 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 SPPL2AQ8TCT8 520 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 KCTD4Q8WVF5 259 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 ANP32BQ92688 251 aaKnown RBP21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 RILPQ96NA2 401 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 TIMP4Q99727 224 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 ZNF358Q9NW07 568 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 CFL2Q9Y281 166 aa21.16■□□□□ 0.98
SMARCD1-209ENST00000550477 TUBAL3A6NHL2 446 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 RAD51CO43502 376 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 TMPRSS11DO60235 418 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 GUCY1B2O75343 617 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 EEDO75530 441 aaKnown RBP21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 LRATO95237 230 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 CLDN9O95484 217 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 ACSL3O95573 720 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 AIFM1O95831 613 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 MTHFD2P13995 350 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 KLK2P20151 261 aa21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 CRYZQ08257 329 aaKnown RBP21.15■□□□□ 0.98
SMARCD1-209ENST00000550477 SNTB1Q13884 538 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms