RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 FAM180BQ6P0A1 224 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 CCDC116Q8IYX3 515 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 CATSPER1Q8NEC5 780 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 OR5L2Q8NGL0 311 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 LRRC8CQ8TDW0 803 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 TSSK3Q96PN8 268 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 NUF2Q9BZD4 464 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 AKTIPQ9H8T0 292 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 MEAF6Q9HAF1 191 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 ENTPD4Q9Y227 616 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 CSAG2Q9Y5P2 127 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 OR5H15A6NDH6 313 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 TMEM200CA6NKL6 621 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 GABRR3A8MPY1 467 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 HDAC3O15379 428 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 ATP8B1O43520 1251 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 F10P00742 488 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 CT62P0C5K7 136 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 MPIP34949 423 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 CASRP41180 1078 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 TNFSF10P50591 281 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 SLC37A1P57057 533 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 FUT7Q11130 342 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 TLR1Q15399 786 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 CEBPEQ15744 281 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 PRSS53Q2L4Q9 553 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 PRICKLE4Q2TBC4 344 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 RNF111Q6ZNA4 994 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 LIX1Q8N485 282 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 CLHC1Q8NHS4 586 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 GFM2Q969S9 779 aaKnown RBP17.98■□□□□ 0.47
DDX54-207ENST00000550016 BBS4Q96RK4 519 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 UTP23Q9BRU9 249 aaKnown RBP17.98■□□□□ 0.47
DDX54-207ENST00000550016 C1orf50Q9BV19 199 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.98■□□□□ 0.47
DDX54-207ENST00000550016 REEP4Q9H6H4 257 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 SLAMF7Q9NQ25 335 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 MYOTQ9UBF9 498 aa17.98■□□□□ 0.47
DDX54-207ENST00000550016 EIF3LQ9Y262 564 aaKnown RBP17.98■□□□□ 0.47
DDX54-207ENST00000550016 YARS2Q9Y2Z4 477 aaKnown RBP17.98■□□□□ 0.47
DDX54-207ENST00000550016 NUP214P35658 2090 aaPredicted RBP17.98■□□□□ 0.47
DDX54-207ENST00000550016 OR6C76A6NM76 312 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 TRPC5OSA6NMA1 111 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 MYO1GB0I1T2 1018 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 AKAP10O43572 662 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 TBX19O60806 448 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 LRATO95237 230 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 KITP10721 976 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 S1PR1P21453 382 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 SSTR4P31391 388 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 CD96P40200 585 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 MGAT2Q10469 447 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 TUBA3CQ13748 450 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 ZNF169Q14929 603 aaPredicted RBP17.97■□□□□ 0.47
DDX54-207ENST00000550016 TUBA3EQ6PEY2 450 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 FAM111BQ6SJ93 734 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 WDR75Q8IWA0 830 aaKnown RBP17.97■□□□□ 0.47
DDX54-207ENST00000550016 LRRC34Q8IZ02 419 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 VWA5B2Q8N398 1253 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 Q8NA96 180 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 ADCY4Q8NFM4 1077 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 OR7G1Q8NGA0 311 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 MTERF3Q96E29 417 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 ZNF764Q96H86 408 aaPredicted RBP17.97■□□□□ 0.47
DDX54-207ENST00000550016 BRINP2Q9C0B6 783 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 LIN28AQ9H9Z2 209 aaKnown RBP17.97■□□□□ 0.47
DDX54-207ENST00000550016 MAT2BQ9NZL9 334 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 NOP53Q9NZM5 478 aaKnown RBP17.97■□□□□ 0.47
DDX54-207ENST00000550016 MARCOQ9UEW3 520 aaPredicted RBP17.97■□□□□ 0.47
DDX54-207ENST00000550016 ZNF639Q9UID6 485 aa17.97■□□□□ 0.47
DDX54-207ENST00000550016 TRAV17A0A0B4J275 112 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 ITGA10O75578 1167 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 SORBS2O94875 1100 aaKnown RBP17.96■□□□□ 0.47
DDX54-207ENST00000550016 CLPSP04118 112 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 TRHRP34981 398 aaPredicted RBP17.96■□□□□ 0.47
DDX54-207ENST00000550016 LTB4RQ15722 352 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 HSP90B2PQ58FF3 399 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 SLC29A4Q7RTT9 530 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 PRICKLE2Q7Z3G6 844 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 R3HCC1LQ7Z5L2 792 aaKnown RBP17.96■□□□□ 0.47
DDX54-207ENST00000550016 C9orf40Q8IXQ3 194 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 ZNF615Q8N8J6 731 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 SUN3Q8TAQ9 357 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 NUBPLQ8TB37 319 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 PIWIL2Q8TC59 973 aaKnown RBP17.96■□□□□ 0.47
DDX54-207ENST00000550016 ZNF675Q8TD23 568 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 CKAP2Q8WWK9 683 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 CTHRC1Q96CG8 243 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 C7orf26Q96N11 449 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 OR10A5Q9H207 317 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 ASIC5Q9NY37 505 aa17.96■□□□□ 0.47
DDX54-207ENST00000550016 BSNQ9UPA5 3926 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 WWP2O00308 870 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 SDHDO14521 159 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 OR2J2O76002 312 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 DDX5P17844 614 aaKnown RBP17.95■□□□□ 0.46
DDX54-207ENST00000550016 LBPP18428 481 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 NTSP30990 170 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 PTGER1P34995 402 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 HPCAL1P37235 193 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms