RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ADH1BP00325 375 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 FCER2P06734 321 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 ATP6V1E1P36543 226 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 RAB8AP61006 207 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TUBA1BP68363 451 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 AGBL4Q5VU57 503 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 FAHD1Q6P587 224 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TUBA1AQ71U36 451 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TESCQ96BS2 214 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 PPCDCQ96CD2 204 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TRMT61AQ96FX7 289 aaKnown RBP10.52□□□□□ -0.73
LINC00661-204ENST00000549354 PRAP1Q96NZ9 151 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 SLC30A2Q9BRI3 323 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TAS2R9Q9NYW1 312 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 NUFIP1Q9UHK0 495 aaKnown RBP10.52□□□□□ -0.73
LINC00661-204ENST00000549354 SAGE2PA6NJ88 616 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 TLX2O43763 284 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 GASTP01350 101 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 C5AR1P21730 350 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 GPR1P46091 355 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 HNRNPFP52597 415 aaKnown RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 MANFP55145 182 aaKnown RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 DLX2Q07687 328 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 PAMR1Q6UXH9 720 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 CEACAM20Q6UY09 585 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 ZNF547Q8IVP9 402 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 SYT14Q8NB59 555 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 OR56A3Q8NH54 315 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 CXorf40AQ8TE69 158 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 GANCQ8TET4 914 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 SMAP2Q8WU79 429 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 PCNPQ8WW12 178 aaKnown RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 RANGRFQ9HD47 186 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 GPATCH2Q9NW75 528 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 TRBV4-1A0A0J9YWV2 114 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 ENTPD6O75354 484 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 GADD45GO95257 159 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 MAT2AP31153 395 aaKnown RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 LTBRP36941 435 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 BUD31P41223 144 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 TBPL1P62380 186 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 SRSF11Q05519 484 aaKnown RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 TARDBPQ13148 414 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 HTR4Q13639 388 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 TBCEQ15813 527 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 CST6Q15828 149 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 AGAP6Q5VW22 663 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 MTFR2Q6P444 385 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 ARMCX6Q7L4S7 300 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 COMMD6Q7Z4G1 85 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 DEPDC4Q8N2C3 294 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 CSGALNACT1Q8TDX6 532 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 COL21A1Q96P44 957 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 AGAP4Q96P64 663 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 SDHCQ99643 169 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 GPSM3Q9Y4H4 160 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 KCNE2Q9Y6J6 123 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 A0A1W2PS29 197 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 CENPXA8MT69 81 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 IFI30P13284 250 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 SNRPD2P62316 118 aaKnown RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 SELENOWP63302 87 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 FADDQ13158 208 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 IQCCQ4KMZ1 466 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 LIPJQ5W064 366 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 ZNF517Q6ZMY9 492 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-204ENST00000549354 GALNT12Q8IXK2 581 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 OR2L2Q8NH16 312 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 FCRL1Q96LA6 429 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 GABRG3Q99928 467 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 DPEP2Q9H4A9 486 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 TRPV5Q9NQA5 729 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 COMMD3Q9UBI1 195 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 TAC3Q9UHF0 121 aa10.51□□□□□ -0.73
LINC00661-204ENST00000549354 A0A1W2PQ09 198 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ISPDA4D126 451 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 TMEM229AB2RXF0 380 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 H3BQ06 376 aaPredicted RBP10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CCRL2O00421 344 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CATP04040 527 aaKnown RBP10.5□□□□□ -0.73
LINC00661-204ENST00000549354 MFSD4BQ5TF39 518 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 OR2G6Q5TZ20 316 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 SMARCD3Q6STE5 483 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 FAM131AQ6UXB0 335 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 SYNPOQ8N3V7 929 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 OR5AR1Q8NGP9 310 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 BBS10Q8TAM1 723 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 C1GALT1C1Q96EU7 318 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 FOPNLQ96NB1 174 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 GABARAPL1Q9H0R8 117 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 TBC1D24Q9ULP9 559 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 PCDHGA2Q9Y5H1 932 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 PEX16Q9Y5Y5 336 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 HSPE1-MOB4S4R3N1 261 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 MED12Q93074 2177 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 A0A1W2PPK0 400 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 PLD2O14939 933 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ADAMDEC1O15204 470 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 NCR1O76036 304 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 C1orf105O95561 183 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms