RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SNRNP27Q8WVK2 155 aaKnown RBP16.32■□□□□ 0.2
HDAC7-227ENST00000548080 CCDC115Q96NT0 180 aa16.32■□□□□ 0.2
HDAC7-227ENST00000548080 SLC26A1Q9H2B4 701 aa16.32■□□□□ 0.2
HDAC7-227ENST00000548080 CMTM6Q9NX76 183 aa16.32■□□□□ 0.2
HDAC7-227ENST00000548080 ABCD2Q9UBJ2 740 aa16.32■□□□□ 0.2
HDAC7-227ENST00000548080 PACSIN3Q9UKS6 424 aa16.32■□□□□ 0.2
HDAC7-227ENST00000548080 L3MBTL1Q9Y468 752 aa16.32■□□□□ 0.2
HDAC7-227ENST00000548080 MAP4K5Q9Y4K4 846 aa16.32■□□□□ 0.2
HDAC7-227ENST00000548080 A0A1W2PR48 441 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 VSTM2BA6NLU5 285 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 RFXANKO14593 260 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 ALOX12BO75342 701 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 CDC123O75794 336 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-227ENST00000548080 CPSF4O95639 269 aaKnown RBP16.31■□□□□ 0.2
HDAC7-227ENST00000548080 ATMQ13315 3056 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 PRSS53Q2L4Q9 553 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 SPATS1Q496A3 300 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 CPZQ66K79 652 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 OR51Q1Q8NH59 317 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 ADAMTS17Q8TE56 1095 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 TMEM125Q96AQ2 219 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 PEX11GQ96HA9 241 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 ANKRD27Q96NW4 1050 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 CRB3Q9BUF7 120 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 DENND2DQ9H6A0 471 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-227ENST00000548080 WDR54Q9H977 334 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 EHD3Q9NZN3 535 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 VAPAQ9P0L0 249 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-227ENST00000548080 CD300AQ9UGN4 299 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 ATG4BQ9Y4P1 393 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 MED13Q9UHV7 2174 aa16.31■□□□□ 0.2
HDAC7-227ENST00000548080 TRBV5-3A0A0A0MS03 114 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 ARGFXA6NJG6 315 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 A8MUI8 341 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 H0YIG0 161 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 NME4O00746 187 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 PROM1O43490 865 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 CHST10O43529 356 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 SORBS2O94875 1100 aaKnown RBP16.3■□□□□ 0.2
HDAC7-227ENST00000548080 ANP32DO95626 131 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 ALBP02768 609 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 EFNA1P20827 205 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-227ENST00000548080 CDKN2CP42773 168 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 RUNDC3AQ59EK9 446 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 RABL3Q5HYI8 236 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 DNAJC14Q6Y2X3 702 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-227ENST00000548080 PPP1R32Q7Z5V6 425 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 MSRB3Q8IXL7 192 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 CLECL1Q8IZS7 167 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 RNF148Q8N7C7 305 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 AMER2Q8N7J2 671 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 OR8J3Q8NGG0 315 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 PANX1Q96RD7 426 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 SH3GL1Q99961 368 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 MAPKAP1Q9BPZ7 522 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 MKKSQ9NPJ1 570 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-227ENST00000548080 TAS2R7Q9NYW3 318 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 PHF11Q9UIL8 331 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 C3orf18Q9UK00 162 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 POLHQ9Y253 713 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 PCDHB14Q9Y5E9 798 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 CROCCQ5TZA2 2017 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 NUP210LQ5VU65 1888 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 IGSF10Q6WRI0 2623 aa16.3■□□□□ 0.2
HDAC7-227ENST00000548080 IGLV3-12A0A075B6K2 115 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 C1orf226A1L170 272 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 PRORSD1PA6NEY8 169 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 AIFM1O95831 613 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 GSNP06396 782 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 HOXB9P17482 250 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 PTPN6P29350 595 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 EEFSECP57772 596 aaKnown RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 RUNX2Q13950 521 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 MPEG1Q2M385 716 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 MINDY4Q4G0A6 757 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 C1orf146Q5VVC0 180 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 MRGPREQ86SM8 312 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 WDR60Q8WVS4 1066 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 UCN3Q969E3 161 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 CIDECQ96AQ7 238 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 C8orf44Q96CB5 159 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 CCDC124Q96CT7 223 aaKnown RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 LYRM4Q9HD34 91 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 SLC6A13Q9NSD5 602 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 SLC25A37Q9NYZ2 338 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 KCMF1Q9P0J7 381 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 MKL2Q9ULH7 1088 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 PCDHGB4Q9UN71 923 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 POMPQ9Y244 141 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 AP3M1Q9Y2T2 418 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 PIEZO2Q9H5I5 2752 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 CHD6Q8TD26 2715 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 A0A1W2PRB8 838 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 IDSB3KWA1 339 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 FAM227AF5H4B4 570 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 PDPK1O15530 556 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 DNAJB5O75953 348 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 BMP10O95393 424 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 HEXBP07686 556 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms