RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 NSG1A0A0A6YYJ2 146 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 A0A1B0GVT2 93 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 ANXA2P2A6NMY6 339 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 B8ZZF3 427 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 DFNA5O60443 496 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 SCELO95171 688 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 HMGN1P05114 100 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 ANXA2P07355 339 aaKnown RBP8.21□□□□□ -1.1
CLIP1-218ENST00000545889 PRDX6P30041 224 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 UQCRC1P31930 480 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 EPHA4P54764 986 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 IRF9Q00978 393 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 LIPEQ05469 1076 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 SGCAQ16586 387 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 CRB2Q5IJ48 1285 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 OLFML2AQ68BL7 652 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 LSMEM1Q8N8F7 131 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 OR8H1Q8NGG4 311 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 G6PC3Q9BUM1 346 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 OR2B2Q9GZK3 357 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 NGBQ9NPG2 151 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 CLEC4AQ9UMR7 237 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 PCDHB10Q9UN67 800 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 SLC6A14Q9UN76 642 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 CDK2AP1O14519 115 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 NUAK1O60285 661 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 PAPSS2O95340 614 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MSX1P28360 303 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 GABRA3P34903 492 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 KLF10Q13118 480 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 GRIN2CQ14957 1233 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ZMYND11Q15326 602 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CXorf57Q6NSI4 855 aaKnown RBP8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ARL9Q6T311 187 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 GPR137CQ8N3F9 429 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 TESCQ96BS2 214 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 RTP4Q96DX8 246 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 BORCS8Q96FH0 119 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 DOHHQ9BU89 302 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ULBP3Q9BZM4 244 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 IL37Q9NZH6 218 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 EHD3Q9NZN3 535 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 EIF3KQ9UBQ5 218 aaKnown RBP8.2□□□□□ -1.1
CLIP1-218ENST00000545889 AP1M2Q9Y6Q5 423 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 FAM25EA8MYX2 175 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 G3V2T6 193 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 EIF1AYO14602 144 aaKnown RBP8.2□□□□□ -1.1
CLIP1-218ENST00000545889 RORAP35398 523 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 FAUP35544 74 aaKnown RBP8.2□□□□□ -1.1
CLIP1-218ENST00000545889 P2RX3P56373 397 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 BDH1Q02338 343 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 TYSND1Q2T9J0 566 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ANKRD26P1Q6NSI1 321 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 FAM122CQ6P4D5 195 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CEACAM20Q6UY09 585 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 RANBP10Q6VN20 620 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 SLC30A8Q8IWU4 369 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CPXM2Q8N436 756 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MEIOBQ8N635 442 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ADAMTS18Q8TE60 1221 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 LPGAT1Q92604 370 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MYADMQ96S97 322 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MKRN2Q9H000 416 aaKnown RBP8.2□□□□□ -1.1
CLIP1-218ENST00000545889 TCF7L1Q9HCS4 588 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CCNB1IP1Q9NPC3 277 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 VSTM2BA6NLU5 285 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 WASH4PA8MWX3 477 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 GPR39O43194 453 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 RNF13O43567 381 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 BRINP1O60477 761 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 RCBTB2O95199 551 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 RLN1P04808 185 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 C1GALT1C1LP0DN25 315 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 SDHBP21912 280 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 HOXC13P31276 330 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MAP3K8P41279 467 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 OR3A3P47888 321 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 OR3A2P47893 321 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 SPINT3P49223 89 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MERTKQ12866 999 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 SCARB2Q14108 478 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 NFE2L1Q14494 772 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 PLEKHG7Q6ZR37 379 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 PGBD5Q8N414 524 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 OR4C15Q8NGM1 316 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ALPK1Q96QP1 1244 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CDC6Q99741 560 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ZFYVE21Q9BQ24 234 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MARCH4Q9P2E8 410 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-218ENST00000545889 KCNN3Q9UGI6 736 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CENPFP49454 3210 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 FAM159BA6NKW6 160 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 hCG_2039718K7EN88 272 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 AREL1O15033 823 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ALX3O95076 343 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 BCHEP06276 602 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ITGA5P08648 1049 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 PSKH1P11801 424 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CTHP32929 405 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 BMP8BP34820 402 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms