RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 MAB21L2Q9Y586 359 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 FXYD6-FXYD2A0A087WZ82 144 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 GXYLT2A0PJZ3 443 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 MYADML2A6NDP7 307 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 PET100P0DJ07 73 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 CTSAP10619 480 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 CD70P32970 193 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 MLLT1Q03111 559 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-209ENST00000545689 PMS2P3Q13401 168 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 DPPA4Q7L190 304 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 DPH7Q9BTV6 452 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 GTPBP2Q9BX10 602 aaKnown RBP11.95□□□□□ -0.5
COL4A6-209ENST00000545689 ACTRT3Q9BYD9 372 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 FXYD6Q9H0Q3 95 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 XKR8Q9H6D3 395 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 COPZ2Q9P299 210 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 A0A1B0GVC2 190 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 MUSKO15146 869 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 SOX9P48436 509 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 SGCBQ16585 318 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 TBRG1Q3YBR2 411 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 TMEM164Q5U3C3 297 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 TLDC1Q6P9B6 456 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 ACBD7Q8N6N7 88 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 CCDC54Q8NEL0 328 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 LRR1Q96L50 414 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 NPLQ9BXD5 320 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-209ENST00000545689 KLF16Q9BXK1 252 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-209ENST00000545689 CPNE5Q9HCH3 593 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 K7ERQ8 282 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 LAMP1P11279 417 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 ADRA1AP35348 466 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 DCTP40126 519 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 VSX2P58304 361 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-209ENST00000545689 OCLNQ16625 522 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 SLC35F1Q5T1Q4 408 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 DTWD1Q8N5C7 304 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 APIPQ96GX9 242 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 TTYH2Q9BSA4 534 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 BOCQ9BWV1 1114 aa11.95□□□□□ -0.5
COL4A6-209ENST00000545689 GPR89AB7ZAQ6 455 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 E7EQ34 232 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 KDM4BO94953 1096 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 GPR89BP0CG08 455 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CKMT1AP12532 417 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 GLP1RP43220 463 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CCINQ13939 588 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 FIP1L1Q6UN15 594 aaKnown RBP11.94□□□□□ -0.5
COL4A6-209ENST00000545689 UGT2A3Q6UWM9 527 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CEACAM19Q7Z692 300 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 Q8N402 240 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 DRAXINQ8NBI3 349 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-209ENST00000545689 OR6N2Q8NGY6 317 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 SEC61A2Q9H9S3 476 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ACSL6Q9UKU0 697 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 GPR45Q9Y5Y3 372 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 HCKP08631 526 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ADRB3P13945 408 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 SLC9A3P48764 834 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ADGRG5Q8IZF4 528 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 GAL3ST1Q99999 423 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 IL26Q9NPH9 171 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 NOP16Q9Y3C1 178 aaKnown RBP11.94□□□□□ -0.5
COL4A6-209ENST00000545689 MYOCOSA0A1B0GUC4 107 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CASC3O15234 703 aaKnown RBP11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ETFAP13804 333 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 TRA2BP62995 288 aaKnown RBP11.94□□□□□ -0.5
COL4A6-209ENST00000545689 PIGFQ07326 219 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CYP27C1Q4G0S4 372 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 PAGE3Q5JUK9 113 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CLECL1Q8IZS7 167 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 TFAP2CQ92754 450 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 TESCQ96BS2 214 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 SLC30A3Q99726 388 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 MYNNQ9NPC7 610 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 EDN1P05305 212 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ERCC1P07992 297 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ANXA3P12429 323 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CXCR4P61073 352 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ULK3Q6PHR2 472 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ALKAL1Q6UXT8 129 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CSNK1A1LQ8N752 337 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 GDPD1Q8N9F7 314 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 C17orf50Q8WW18 174 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 LHPPQ9H008 270 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CHD4Q14839 1912 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 OR6C74A6NCV1 312 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 KHNYNO15037 678 aaKnown RBP11.94□□□□□ -0.5
COL4A6-209ENST00000545689 HEXBP07686 556 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 PGCP20142 388 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 ARHGAP19Q14CB8 494 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 TSC22D1Q15714 1073 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 CST6Q15828 149 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 TSPAN33Q86UF1 283 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 MDGA1Q8NFP4 955 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 DAZLQ92904 295 aaKnown RBP11.94□□□□□ -0.5
COL4A6-209ENST00000545689 FOLH1BQ9HBA9 442 aa11.94□□□□□ -0.5
COL4A6-209ENST00000545689 A0A1W2PP55 124 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 A0A1W2PQU0 124 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 TP53I11O14683 189 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms