RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 UMPSP11172 480 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 FBLP22087 321 aaKnown RBP28.54■■■□□ 2.16
CCM2-219ENST00000544363 PCGF2P35227 344 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 HSD17B7P56937 341 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 DSTNP60981 165 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 RPS26P62854 115 aaKnown RBP28.54■■■□□ 2.16
CCM2-219ENST00000544363 SLC34A1Q06495 639 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 CEACAM20Q6UY09 585 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 MED25Q71SY5 747 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 TMEM126BQ8IUX1 230 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 HORMAD2Q8N7B1 307 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 MAL2Q969L2 176 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 SLCO4A1Q96BD0 722 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 OR1F2PQ96R84 312 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 YIPF2Q9BWQ6 316 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 FAM86C1Q9NVL1 165 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 NTMQ9P121 344 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 EFCAB7A8K855 629 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 GPIP06744 558 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 NBL1P41271 181 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 MAGEA8P43361 318 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 PRKAG1P54619 331 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 IGLV3-21P80748 117 aaPredicted RBP28.54■■■□□ 2.16
CCM2-219ENST00000544363 ZNF628Q5EBL2 1059 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 C1orf189Q5VU69 101 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 TNFAIP8L2Q6P589 184 aaPredicted RBP28.54■■■□□ 2.16
CCM2-219ENST00000544363 RBM44Q6ZP01 1051 aaKnown RBP28.54■■■□□ 2.16
CCM2-219ENST00000544363 PPP1R3BQ86XI6 285 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 NUP43Q8NFH3 380 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 OR7G2Q8NG99 324 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 CCM2LQ9NUG4 571 aaPredicted RBP28.54■■■□□ 2.16
CCM2-219ENST00000544363 AP4S1Q9Y587 144 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 SCRG1O75711 98 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 SLITRK5O94991 958 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 TGM1P22735 817 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 PSMA4P25789 261 aaKnown RBP28.53■■■□□ 2.16
CCM2-219ENST00000544363 BTG2P78543 158 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 MRPS35P82673 323 aaKnown RBP28.53■■■□□ 2.16
CCM2-219ENST00000544363 STX4Q12846 297 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 ILKQ13418 452 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 PWWP2BQ6NUJ5 590 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 ADGRG5Q8IZF4 528 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 LANCL2Q9NS86 450 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 PTGFRNQ9P2B2 879 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 TRPC4Q9UBN4 977 aa28.53■■■□□ 2.16
CCM2-219ENST00000544363 UPK1AO00322 258 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 TIAF1O95411 115 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 FGF5P12034 268 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 NT5EP21589 574 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 MATN1P21941 496 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 IL10P22301 178 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 IL11RAQ14626 422 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 ZNF630Q2M218 657 aaPredicted RBP28.52■■■□□ 2.16
CCM2-219ENST00000544363 ARHGAP40Q5TG30 622 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 IRAK1BP1Q5VVH5 260 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 RNF111Q6ZNA4 994 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 ZNF675Q8TD23 568 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 SERHL2Q9H4I8 314 aa28.52■■■□□ 2.16
CCM2-219ENST00000544363 DCAF13Q9NV06 445 aaKnown RBP28.52■■■□□ 2.16
CCM2-219ENST00000544363 DDX18Q9NVP1 670 aaKnown RBP28.52■■■□□ 2.16
CCM2-219ENST00000544363 TGFBR3LH3BV60 316 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 JRKO75564 520 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 IFI6P09912 130 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 ATXN8OSP0DMR3 200 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 ARAFP10398 606 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 CCKBRP32239 447 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 SOX18P35713 384 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 E2F1Q01094 437 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 EEF1A2Q05639 463 aaKnown RBP28.51■■■□□ 2.15
CCM2-219ENST00000544363 PRICKLE4Q2TBC4 344 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 OR2L13Q8N349 312 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 BMPERQ8N8U9 685 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 ALOXE3Q9BYJ1 711 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 ANKRA2Q9H9E1 313 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 APMAPQ9HDC9 416 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 ANAPC2Q9UJX6 822 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 CLDN16Q9Y5I7 305 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 HMGN2P05204 90 aaKnown RBP28.51■■■□□ 2.15
CCM2-219ENST00000544363 HBQ1P09105 142 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 SCARB2Q14108 478 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 ST13P4Q8IZP2 240 aaPredicted RBP28.51■■■□□ 2.15
CCM2-219ENST00000544363 MIPOL1Q8TD10 442 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 PPWD1Q96BP3 646 aaKnown RBP28.51■■■□□ 2.15
CCM2-219ENST00000544363 EFHD1Q9BUP0 239 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 ASPSCR1Q9BZE9 553 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 OR51I1Q9H343 314 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 OLAHQ9NV23 265 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 ARMC1Q9NVT9 282 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 THUMPD1Q9NXG2 353 aaKnown RBP28.51■■■□□ 2.15
CCM2-219ENST00000544363 STOML1Q9UBI4 398 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 PRDM4Q9UKN5 801 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 AURKCQ9UQB9 309 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 MMACHCQ9Y4U1 282 aa28.51■■■□□ 2.15
CCM2-219ENST00000544363 A0A087WV62 115 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 HMGN4O00479 90 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 OR10H2O60403 315 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 RFPL3O75679 317 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 BMP10O95393 424 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 KDELR2P33947 212 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 KHKP50053 298 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms