RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 AMZ2Q86W34 360 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CBWD2Q8IUF1 395 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 PHACTR4Q8IZ21 702 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 HS3ST5Q8IZT8 346 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ZCCHC9Q8N567 271 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 OR9Q1Q8NGQ5 310 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 OR10K1Q8NGX5 313 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 NSUN4Q96CB9 384 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 THAP2Q9H0W7 228 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 EXO5Q9H790 373 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ACTR8Q9H981 624 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 JPH1Q9HDC5 661 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 PGPEP1Q9NXJ5 209 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 TRMT112Q9UI30 125 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ING4Q9UNL4 249 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ATRNL1Q5VV63 1379 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CEP350Q5VT06 3117 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CNTNAP4Q9C0A0 1308 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 A0A1B0GV72 72 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 HMX2A2RU54 273 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 SURF4O15260 269 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 PHGDHO43175 533 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 PMPCBO75439 489 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CTPS1P17812 591 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 PAX6P26367 422 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 DCKP27707 260 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CCND3P30281 292 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 SUCLG1P53597 346 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 RPS7P62081 194 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 FABP9Q0Z7S8 132 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF155Q12901 538 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ODF4Q2M2E3 257 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 C14orf28Q4W4Y0 310 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CARM1Q86X55 608 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 RAB43Q86YS6 212 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CELF5Q8N6W0 485 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 OR4M2Q8NGB6 313 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 PDXPQ96GD0 296 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CLSTN3Q9BQT9 956 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 MED10Q9BTT4 135 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 TSSK1BQ9BXA7 367 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 GPR87Q9BY21 358 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 MKKSQ9NPJ1 570 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 MRPL15Q9P015 296 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 H3BNH8 94 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ADAM10O14672 748 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 SLC28A2O43868 658 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 IGFBP4P22692 258 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 GCGRP47871 477 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 PTTG1IPP53801 180 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ITGA1P56199 1179 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ID2Q02363 134 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 GPR33Q49SQ1 333 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 SEZ6Q53EL9 994 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 LEMD1Q68G75 181 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ASPHD2Q6ICH7 369 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 C1orf186Q6ZWK4 172 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 MTSS1LQ765P7 747 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 LYSMD3Q7Z3D4 306 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 SERINC5Q86VE9 423 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ZZZ3Q8IYH5 903 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 FAM160A2Q8N612 972 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 FAM83FQ8NEG4 500 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 OR56A3Q8NH54 315 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 OR6X1Q8NH79 312 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ZFP90Q8TF47 636 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 RAD54LQ92698 747 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.48□□□□□ -1.052e-7■■■■■ 62.8
VPS13D-212ENST00000543766 FAM120BQ96EK7 910 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 LRR1Q96L50 414 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 XPR1Q9UBH6 696 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 PSMD13Q9UNM6 376 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 MINPP1Q9UNW1 487 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 MAP4K5Q9Y4K4 846 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 UBA6A0AVT1 1052 aaPredicted RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 FABP12A6NFH5 140 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 F5H6K3 240 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 AQP7O14520 342 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 NME6O75414 186 aaPredicted RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 SLCO2B1O94956 709 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ONECUT2O95948 504 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ADAP00813 363 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 MBPP02686 304 aaPredicted RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 MT-ND2P03891 347 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 C5AR1P21730 350 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 KLRC2P26717 231 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 RPL19P84098 196 aaKnown RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 C2orf80Q0P641 193 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 CAMK1Q14012 370 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 PNLIPRP3Q17RR3 467 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 FAM110CQ1W6H9 321 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 OVCH2Q7RTZ1 564 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ZFAND4Q86XD8 727 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 PQLC1Q8N2U9 271 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 OR10W1Q8NGF6 305 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 MAPK15Q8TD08 544 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 SMPDL3AQ92484 453 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 MS4A3Q96HJ5 214 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 TAS2R14Q9NYV8 317 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 BAZ2BQ9UIF8 2168 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms