RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 LEF1Q9UJU2 399 aaPredicted RBP21.58■■□□□ 1.05
HOMER3-205ENST00000542541 IGHV1-45A0A0A0MS14 117 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 BBIP1A8MTZ0 92 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 CAPN14A8MX76 684 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 C1QTNF9BB2RNN3 333 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 C1QTNF9P0C862 333 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 PRDX6P30041 224 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 EEF1A2Q05639 463 aaKnown RBP21.58■■□□□ 1.04
HOMER3-205ENST00000542541 PRICKLE4Q2TBC4 344 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 LRRC69Q6ZNQ3 347 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 SNX32Q86XE0 403 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 MORN4Q8NDC4 146 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 THAP4Q8WY91 577 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 PANX1Q96RD7 426 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 P4HTMQ9NXG6 502 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 SSUH2Q9Y2M2 353 aa21.58■■□□□ 1.04
HOMER3-205ENST00000542541 CROCCQ5TZA2 2017 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 IGHV3-20A0A0C4DH32 117 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 TMEM8BA6NDV4 472 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 SAGE2PA6NJ88 616 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 CPSF4O95639 269 aaKnown RBP21.57■■□□□ 1.04
HOMER3-205ENST00000542541 IFI6P09912 130 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 PGDP52209 483 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 ZNF267Q14586 743 aaPredicted RBP21.57■■□□□ 1.04
HOMER3-205ENST00000542541 MMEL1Q495T6 779 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 BROXQ5VW32 411 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 TRPM8Q7Z2W7 1104 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 TREML1Q86YW5 311 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 SPACA3Q8IXA5 215 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 CLECL1Q8IZS7 167 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 VWA5B2Q8N398 1253 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 ADCY4Q8NFM4 1077 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 OR4A15Q8NGL6 344 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 PSMA8Q8TAA3 256 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 MAT2BQ9NZL9 334 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 CHD8Q9HCK8 2581 aa21.57■■□□□ 1.04
HOMER3-205ENST00000542541 CCDC88CQ9P219 2028 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 NSG1A0A0A6YYJ2 146 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 CDC14CA4D256 554 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 PLOD2O00469 737 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 RFXANKO14593 260 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 SEC24DO94855 1032 aaPredicted RBP21.56■■□□□ 1.04
HOMER3-205ENST00000542541 ABCB1P08183 1280 aaPredicted RBP21.56■■□□□ 1.04
HOMER3-205ENST00000542541 COX6A1P12074 109 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 COX4I1P13073 169 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 ICAM2P13598 275 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 CD1EP15812 388 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 TRPC1P48995 793 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 HBA1P69905 142 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 SRSF6Q13247 344 aaKnown RBP21.56■■□□□ 1.04
HOMER3-205ENST00000542541 PCOLCEQ15113 449 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 TLR1Q15399 786 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 LTB4RQ15722 352 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 ZNF628Q5EBL2 1059 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 COQ5Q5HYK3 327 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 C6orf10Q5SRN2 563 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 DGAT2L6Q6ZPD8 337 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 TRIML2Q8N7C3 387 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 DNAJB8Q8NHS0 232 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 CTHRC1Q96CG8 243 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 SENP5Q96HI0 755 aaPredicted RBP21.56■■□□□ 1.04
HOMER3-205ENST00000542541 FBXL20Q96IG2 436 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 DCBLD2Q96PD2 775 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 WDR77Q9BQA1 342 aaPredicted RBP21.56■■□□□ 1.04
HOMER3-205ENST00000542541 MESP1Q9BRJ9 268 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 C3orf14Q9HBI5 128 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 PTGFRNQ9P2B2 879 aa21.56■■□□□ 1.04
HOMER3-205ENST00000542541 A0A087WV62 115 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 PLOD3O60568 738 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 BCAS2O75934 225 aaPredicted RBP21.55■■□□□ 1.04
HOMER3-205ENST00000542541 HPP00738 406 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 MGAT2Q10469 447 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 EXT1Q16394 746 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 SLC2A7Q6PXP3 512 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 B3GNT7Q8NFL0 401 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 GOT1L1Q8NHS2 421 aaPredicted RBP21.55■■□□□ 1.04
HOMER3-205ENST00000542541 GTF2H4Q92759 462 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 KAT2AQ92830 837 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 ELP4Q96EB1 424 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 CNPPD1Q9BV87 410 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 COPS7AQ9UBW8 275 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 PPIEQ9UNP9 301 aaKnown RBP21.55■■□□□ 1.04
HOMER3-205ENST00000542541 MAN2B2Q9Y2E5 1009 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 SNX8Q9Y5X2 465 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 CELSR3Q9NYQ7 3312 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 NKX2-8O15522 239 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 ANP32DO95626 131 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 KRT72Q14CN4 511 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 FAM111BQ6SJ93 734 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 TMEM107Q6UX40 140 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 CCDC81Q6ZN84 652 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 PCYOX1LQ8NBM8 494 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 OR7G1Q8NGA0 311 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 SLC2A12Q8TD20 617 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 MOAP1Q96BY2 351 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 FER1L6-AS2Q96M78 137 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 OR8D2Q9GZM6 311 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 SERHLQ9NQF3 203 aa21.55■■□□□ 1.04
HOMER3-205ENST00000542541 DDX18Q9NVP1 670 aaKnown RBP21.55■■□□□ 1.04
HOMER3-205ENST00000542541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms