RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 DLGAP3O95886 979 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 CLPTM1O96005 669 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 CDK4P11802 303 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 ATP6V1B2P21281 511 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 MRPL19P49406 292 aaKnown RBP7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 GSK3BP49841 420 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 CDK9P50750 372 aaKnown RBP7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 DAB2P98082 770 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 LIPEQ05469 1076 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 RGS1Q08116 209 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 PWP1Q13610 501 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 APOFQ13790 326 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 SMU1Q2TAY7 513 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 OGFRL1Q5TC84 451 aaPredicted RBP7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 C1orf189Q5VU69 101 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 HMGN2P46Q86SG4 172 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 SPPL2CQ8IUH8 684 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 IFI44Q8TCB0 444 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 SLC26A7Q8TE54 656 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 ZFPM2Q8WW38 1151 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 MAL2Q969L2 176 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 ZUFSPQ96AP4 578 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 ROPN1LQ96C74 230 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 NMD3Q96D46 503 aaKnown RBP7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 VPS50Q96JG6 964 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 C10orf90Q96M02 699 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 NT5DC2Q9H857 520 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 DDX31Q9H8H2 851 aaKnown RBP7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 C6orf203Q9P0P8 240 aaPredicted RBP7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 UTS2RQ9UKP6 389 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 TSC22D4Q9Y3Q8 395 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 PCDHGA2Q9Y5H1 932 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 AK5Q9Y6K8 562 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 FRYQ5TBA9 3013 aa7.28□□□□□ -1.24
AC005840.3-201ENST00000541888 TLCD2A6NGC4 264 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 DUX1O43812 170 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 B4GALT2O60909 372 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 SEMA3DO95025 777 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 TIAF1O95411 115 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 CER1O95813 267 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 PORP16435 677 aaPredicted RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 HOXB9P17482 250 aaPredicted RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 ME2P23368 584 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 AQP1P29972 269 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 OR1D4P47884 311 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 GABRA4P48169 554 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 NR1H2P55055 460 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 LIM2P55344 173 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 STXBP1P61764 594 aaKnown RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 ZNF33BQ06732 778 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 FLOT2Q14254 428 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 NR0B2Q15466 257 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 SFT2D3Q587I9 215 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 FAM69BQ5VUD6 431 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 KLHL35Q6PF15 583 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 RNF111Q6ZNA4 994 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 SHISA6Q6ZSJ9 500 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 NCCRP1Q6ZVX7 275 aaPredicted RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 BMP8AQ7Z5Y6 402 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 PRSS58Q8IYP2 241 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 DNAJC22Q8N4W6 341 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 TBC1D19Q8N5T2 526 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 FAM86B1Q8N7N1 296 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 TTLQ8NG68 377 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 CNRIP1Q96F85 164 aaPredicted RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 QRFPRQ96P65 431 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 CTRCQ99895 268 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 MESP1Q9BRJ9 268 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 YIPF4Q9BSR8 244 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 SARGQ9BW04 601 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 TMPRSS13Q9BYE2 586 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 CLEC4MQ9H2X3 399 aaPredicted RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 CXorf36Q9H7Y0 433 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 APMAPQ9HDC9 416 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 C1GALT1Q9NS00 363 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 GID8Q9NWU2 228 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 AHSPQ9NZD4 102 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 CD300AQ9UGN4 299 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 NDOR1Q9UHB4 597 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 RAPGEFL1Q9UHV5 662 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 DTNAQ9Y4J8 743 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 CSNK1G3Q9Y6M4 447 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 COL27A1Q8IZC6 1860 aaPredicted RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 RIF1Q5UIP0 2472 aaKnown RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 TRBV5-3A0A0A0MS03 114 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 A0A1W2PRB8 838 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 H3BNX3 289 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 CDX4O14627 284 aaPredicted RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 ACOT8O14734 319 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 PROM1O43490 865 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 FOXS1O43638 330 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 EPN2O95208 641 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 ZBTB11O95625 1053 aaPredicted RBP7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 IGLV1-40P01703 118 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 TFAP2AP05549 437 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 ALOX12P18054 663 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 DDCP20711 480 aa7.27□□□□□ -1.25
AC005840.3-201ENST00000541888 PPP2R1BP30154 601 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms