RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 CYP20A1Q6UW02 462 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 TMEM64Q6YI46 380 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 MEX3BQ6ZN04 569 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 SEM1Q6ZVN7 128 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 NUDT13Q86X67 352 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 MMP21Q8N119 569 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 FBXW8Q8N3Y1 598 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 OR4F6Q8NGB9 312 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ASB5Q8WWX0 329 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 TP53INP1Q96A56 240 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ART5Q96L15 291 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 SMC6Q96SB8 1091 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 PELOQ9BRX2 385 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 CENPKQ9BS16 269 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 MRPL1Q9BYD6 325 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF703Q9H7S9 590 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ZFP64Q9NPA5 681 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ACKR4Q9NPB9 350 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 COQ3Q9NZJ6 369 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF180Q9UJW8 692 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ADAM29Q9UKF5 820 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 HIVEP1P15822 2718 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 A0A0G2JNJ9 132 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 ANKRD33BA6NCL7 494 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 OR6C76A6NM76 312 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 TRIM49D1C9J1S8 452 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 ACOT7O00154 380 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 BCKDKO14874 412 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 HCN1O60741 890 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 MSX1P28360 303 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 SERPINB9P50453 376 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 XKP51811 444 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 CDH13P55290 713 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 DUSP2Q05923 314 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 DUSP8Q13202 625 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 PRAMEF20Q5VT98 475 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 LETMD1Q6P1Q0 360 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF585AQ6P3V2 769 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 RNF111Q6ZNA4 994 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 TIFABQ6ZNK6 161 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 ACAD11Q709F0 780 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 DMRTC2Q8IXT2 367 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 SIMC1Q8NDZ2 872 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 UHMK1Q8TAS1 419 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 SLC22A8Q8TCC7 542 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 TRPC4APQ8TEL6 797 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF483Q8TF39 744 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 IFT81Q8WYA0 676 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 TM4SF18Q96CE8 201 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 C16orf45Q96MC5 204 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 MRPL57Q9BQC6 102 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 MCCC2Q9HCC0 563 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 RYDENQ9NUL5 291 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 CNIH4Q9P003 139 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 Q9UFV3 132 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 MTRF1LQ9UGC7 380 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF639Q9UID6 485 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 DTX4Q9Y2E6 619 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 F8P00451 2351 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 CELSR1Q9NYQ6 3014 aa10.85□□□□□ -0.67
CLSTN3-211ENST00000541667 TRGV5A0A0B4J1U4 118 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 C2orf92A0A1B0GVN3 265 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 KDM4EB2RXH2 506 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 POC1B-GALNT4F8VUJ3 575 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 OR10H2O60403 315 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 LRATO95237 230 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 PDYNP01213 254 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 INHBAP08476 426 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 HOXD4P09016 255 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 CPMP14384 443 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 TSPAN8P19075 237 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 SERPINB3P29508 390 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 HSD17B3P37058 310 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 MAN2A2P49641 1150 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 CCNG1P51959 295 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 DLX5P56178 289 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 FBXW4P57775 412 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 PHEXP78562 749 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 TLE4Q04727 773 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 TSNAXIP1Q2TAA8 658 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 PRICKLE4Q2TBC4 344 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 UNC50Q53HI1 259 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 BICRALQ6AI39 1079 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 DESI1Q6ICB0 168 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 OR52E8Q6IFG1 317 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 POMZP3Q6PJE2 187 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 SLC29A4Q7RTT9 530 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 MILR1Q7Z6M3 343 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 DND1Q8IYX4 353 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 MYRIPQ8NFW9 859 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 OR4K14Q8NGD5 310 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 SPPL2AQ8TCT8 520 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 ATP6V1E2Q96A05 226 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 CTHRC1Q96CG8 243 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF681Q96N22 645 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 ANGPTL4Q9BY76 406 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 TSPYL1Q9H0U9 437 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 OR10A5Q9H207 317 aa10.84□□□□□ -0.67
CLSTN3-211ENST00000541667 UBQLN3Q9H347 655 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms