RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 FBXO15Q8NCQ5 510 aaPredicted RBP16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 COX14Q96I36 57 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 GIN1Q9NXP7 522 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 TDRD6O60522 2096 aaKnown RBP16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 SH3PXD2BA1X283 911 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 LRIT2A6NDA9 550 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 HMGN4O00479 90 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 CPN2P22792 545 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 CRISP1P54107 249 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 RPE65Q16518 533 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 SNAPC1Q16533 368 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 ATAD3BQ5T9A4 648 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 GTF2IRD2BQ6EKJ0 949 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 SYCE2Q6PIF2 218 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 GTF2IRD2Q86UP8 949 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 HRASLS5Q96KN8 279 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 UCK2Q9BZX2 261 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 KCNE3Q9Y6H6 103 aa16.16■□□□□ 0.18
EPB41L3-204ENST00000540638 TRIM64CA6NLI5 447 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 TBX1O43435 398 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 PDE9AO76083 593 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CSNK2A2P19784 350 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 S100A5P33763 92 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 IDUAP35475 653 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CCNJQ5T5M9 372 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 SLC16A12Q6ZSM3 486 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 OR1E3Q8WZA6 343 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 POP5Q969H6 163 aaKnown RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 ZG16BQ96DA0 208 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 OR2M4Q96R27 311 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 OR5M11Q96RB7 305 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 COLEC10Q9Y6Z7 277 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 ALPK2Q86TB3 2170 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 A0A1W2PR48 441 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 ZNF701M0R085 212 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CDC123O75794 336 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 AIFM1O95831 613 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 TBX6O95947 436 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 HOXB6P17509 224 aaKnown RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 HIST1H1TP22492 207 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 FCARP24071 287 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 SEC23BQ15437 767 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 C10orf62Q5T681 223 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 RTL10Q7L3V2 364 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 PRSS48Q7RTY5 328 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 MAPKAP1Q9BPZ7 522 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CCDC3Q9BQI4 270 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 RSPH9Q9H1X1 276 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 DUSP21Q9H596 190 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 MVB12BQ9H7P6 319 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CNIH4Q9P003 139 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 ICKQ9UPZ9 632 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CACNA1CQ13936 2221 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 ARHGEF17Q96PE2 2063 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 OR6C74A6NCV1 312 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CLCA1A8K7I4 914 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 KLHL18O94889 574 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 PCSK2P16519 638 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 PCMT1P22061 227 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 MAGEA10P43363 369 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 ADPRHP54922 357 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CTF1Q16619 201 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 ZNF311Q5JNZ3 666 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 FRMPD2BQ6IN97 320 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 PARGQ86W56 976 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 OR2L3Q8NG85 312 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 APH1BQ8WW43 257 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 ART5Q96L15 291 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 CNPPD1Q9BV87 410 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 C6orf106Q9H6K1 298 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 NTNG1Q9Y2I2 539 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 PCDHGA2Q9Y5H1 932 aa16.15■□□□□ 0.18
EPB41L3-204ENST00000540638 NPIPA5A0A0B4J1W7 369 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 A0A1W2PPV9 198 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 TTC36A6NLP5 189 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 CLDN24A6NM45 220 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 NPIPA7E9PJI5 369 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 ENTPD6O75354 484 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 ZNF888P0CJ79 500 aaPredicted RBP16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 NPIPA8P0DM63 369 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 JUNBP17275 347 aaPredicted RBP16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 COL9A1P20849 921 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 HSD17B2P37059 387 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 REEP5Q00765 189 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 FAHD1Q6P587 224 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 ZC3H14Q6PJT7 736 aaKnown RBP16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 ZNF730Q6ZMV8 503 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 IKBIPQ70UQ0 350 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 CLIP3Q96DZ5 547 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 MTERF3Q96E29 417 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 AMDHD1Q96NU7 426 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 SPATA9Q9BWV2 254 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 PELI2Q9HAT8 420 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 KLHL3Q9UH77 587 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 DENND4CQ5VZ89 1909 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 PRSS38A1L453 326 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 B4GALT2O60909 372 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 DLGAP3O95886 979 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 MPIP34949 423 aa16.14■□□□□ 0.17
EPB41L3-204ENST00000540638 PXNP49023 591 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms