RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 SALL1Q9NSC2 1324 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 IGKV3D-20A0A0C4DH25 116 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 ARPC1BO15143 372 aaKnown RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 GALR3O60755 368 aaPredicted RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 SH3BGRLO75368 114 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 CRLF1O75462 422 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 FRAT2O75474 233 aaPredicted RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 CXCL14O95715 111 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 HPP00738 406 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 SLC4A1P02730 911 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 HOXD4P09016 255 aaPredicted RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 CAPN2P17655 700 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 MATKP42679 507 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 PGFP49763 221 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 ZNF131P52739 623 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 NDST1P52848 882 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 RPS4XP62701 263 aaKnown RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 CDC37Q16543 378 aaPredicted RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 UNC50Q53HI1 259 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 C9orf66Q5T8R8 295 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 LUZP1Q86V48 1076 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 RELL2Q8NC24 303 aaPredicted RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 CHDHQ8NE62 594 aaPredicted RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 SLC13A3Q8WWT9 602 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 ZNF577Q9BSK1 485 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 XPO4Q9C0E2 1151 aaKnown RBP5.33□□□□□ -1.56
TRAV11-201ENST00000539512 TNMDQ9H2S6 317 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 CIDEBQ9UHD4 219 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 CCPG1Q9ULG6 757 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 SLC6A5Q9Y345 797 aa5.33□□□□□ -1.56
TRAV11-201ENST00000539512 DHX29Q7Z478 1369 aaKnown RBP5.32□□□□□ -1.56
TRAV11-201ENST00000539512 RNF103-CHMP3A0A140T963 221 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 K7ERI5 159 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 GNSP15586 552 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 TMOD1P28289 359 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 SFNP31947 248 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 TKTL1P51854 596 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 NLRP11P59045 1033 aaKnown RBP5.32□□□□□ -1.56
TRAV11-201ENST00000539512 TRA2BP62995 288 aaKnown RBP5.32□□□□□ -1.56
TRAV11-201ENST00000539512 TCHHL1Q5QJ38 904 aaPredicted RBP5.32□□□□□ -1.56
TRAV11-201ENST00000539512 ADAMTSL2Q86TH1 951 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 PYROXD2Q8N2H3 581 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 CHCHD4Q8N4Q1 142 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 PNPLA2Q96AD5 504 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 RPP25Q9BUL9 199 aaKnown RBP5.32□□□□□ -1.56
TRAV11-201ENST00000539512 CCDC28BQ9BUN5 200 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 Q9HAA7 133 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAV11-201ENST00000539512 TUBGCP4Q9UGJ1 667 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 ATG4BQ9Y4P1 393 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 STYXL1Q9Y6J8 313 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 FGD5Q6ZNL6 1462 aa5.32□□□□□ -1.56
TRAV11-201ENST00000539512 CFAP73A6NFT4 308 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 RPL37AP8A6NKH3 93 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 SSX5O60225 188 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 ALPPP05187 535 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 PROS1P07225 676 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 ALPPL2P10696 532 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 FOSL2P15408 326 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 BRCC3P46736 316 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 RPL34P49207 117 aaKnown RBP5.31□□□□□ -1.56
TRAV11-201ENST00000539512 GSK3BP49841 420 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 ITPK1Q13572 414 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 VWA2Q5GFL6 755 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 ZNF506Q5JVG8 444 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 GPR142Q7Z601 462 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 CCDC71Q8IV32 467 aaPredicted RBP5.31□□□□□ -1.56
TRAV11-201ENST00000539512 ARL14Q8N4G2 192 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 LRRC17Q8N6Y2 441 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 KIAA1524Q8TCG1 905 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 JPH2Q9BR39 696 aaPredicted RBP5.31□□□□□ -1.56
TRAV11-201ENST00000539512 FTHL17Q9BXU8 183 aa5.31□□□□□ -1.56
TRAV11-201ENST00000539512 RNF41Q9H4P4 317 aaPredicted RBP5.31□□□□□ -1.56
TRAV11-201ENST00000539512 RPH3AQ9Y2J0 694 aaPredicted RBP5.31□□□□□ -1.56
TRAV11-201ENST00000539512 EI24O14681 340 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 NUDT14O95848 222 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 PGK2P07205 417 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 CCL11P51671 97 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 CRMP1Q14194 572 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 HKDC1Q2TB90 917 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 EPC2Q52LR7 807 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 APOOLQ6UXV4 268 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 SLC22A16Q86VW1 577 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 P2RY8Q86VZ1 359 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 OR4F5Q8NH21 305 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 TMEM37Q8WXS4 190 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 PHYHIPQ92561 330 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 COQ7Q99807 217 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 C19orf43Q9BQ61 176 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 GNB4Q9HAV0 340 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 IL1RL2Q9HB29 575 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 ABCC13Q9NSE7 274 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 HOOK1Q9UJC3 728 aaKnown RBP5.3□□□□□ -1.56
TRAV11-201ENST00000539512 DNPEPQ9ULA0 475 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 ODF2LQ9ULJ1 636 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 KIAA1217Q5T5P2 1943 aa5.3□□□□□ -1.56
TRAV11-201ENST00000539512 IGHV3-16A0A0C4DH30 117 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 MCF2LO15068 1137 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 LRP3O75074 770 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 GATA1P15976 413 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms