RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SUN3Q8TAQ9 357 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 CDCA4Q9BXL8 241 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 S1PR5Q9H228 398 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 SELENONQ9NZV5 590 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 ERGIC3Q9Y282 383 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 WASHC1A8K0Z3 465 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 NADKO95544 446 aaPredicted RBP16.92■□□□□ 0.3
GNE-204ENST00000539208 STSP08842 583 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 NUDT6P53370 316 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 STXBP1P61764 594 aaKnown RBP16.92■□□□□ 0.3
GNE-204ENST00000539208 NCS1P62166 190 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 TUBA1BP68363 451 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 CEBPEQ15744 281 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 TIGD6Q17RP2 521 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 USP30Q70CQ3 517 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 TUBA1AQ71U36 451 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 AMIGO1Q86WK6 493 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 OR56A1Q8NGH5 318 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 OR5D16Q8NGK9 328 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 ZNF675Q8TD23 568 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 CNRIP1Q96F85 164 aaPredicted RBP16.92■□□□□ 0.3
GNE-204ENST00000539208 MACROD1Q9BQ69 325 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 BTBD2Q9BX70 525 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 ANKHQ9HCJ1 492 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 CLN6Q9NWW5 311 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 TRPC4Q9UBN4 977 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 OSGIN1Q9UJX0 560 aa16.92■□□□□ 0.3
GNE-204ENST00000539208 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.92■□□□□ 0.3
GNE-204ENST00000539208 A0A1W2PRQ8 180 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 GLOD5A6NK44 160 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 EFCAB9A8MZ26 197 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 PRKRAO75569 313 aaKnown RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 AIFM1O95831 613 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 FHP07954 510 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 CHRM5P08912 532 aaPredicted RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 HOXB2P14652 356 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 COL9A1P20849 921 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 CNR2P34972 360 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 SNRPGP62308 76 aaKnown RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 PPP2CBP62714 309 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 PPP2CAP67775 309 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 GPR19Q15760 415 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 TMEM236Q5W0B7 351 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 DEF8Q6ZN54 512 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 PTCHD4Q6ZW05 846 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 MTSS1LQ765P7 747 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 SLC46A3Q7Z3Q1 461 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 IGFN1Q86VF2 1251 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 RBM45Q8IUH3 476 aaKnown RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 B3GNT7Q8NFL0 401 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 CHPT1Q8WUD6 406 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 TBC1D29Q9UFV1 150 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 APOBEC3BQ9UH17 382 aaKnown RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 KLF15Q9UIH9 416 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 PCOLCE2Q9UKZ9 415 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 A4GNTQ9UNA3 340 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 ENTPD4Q9Y227 616 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 PMF1-BGLAPU3KQ54 211 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 C5orf42Q9H799 3197 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 CCDC88CQ9P219 2028 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 A0A0G2JPF8 293 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 HNRNPCL2B2RXH8 293 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 HNRNPCL3B7ZW38 293 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 PROM1O43490 865 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 ERAL1O75616 437 aaKnown RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 SULT1C4O75897 302 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 STATHP02808 62 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 HNRNPCL4P0DMR1 293 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 PIPP12273 146 aaPredicted RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 F3P13726 295 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 CSNK2A2P19784 350 aaPredicted RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 TGM3Q08188 693 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 SLX4IPQ5VYV7 408 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 SZRD1Q7Z422 152 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 ADCK1Q86TW2 530 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 PAQR7Q86WK9 346 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 LINC00471Q8N535 108 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 OR6Q1Q8NGQ2 317 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 VANGL1Q8TAA9 524 aaPredicted RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 LCN9Q8WX39 176 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 RPL3LQ92901 407 aaKnown RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 COX4I2Q96KJ9 171 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 LYARQ9NX58 379 aaKnown RBP16.91■□□□□ 0.3
GNE-204ENST00000539208 MSRAQ9UJ68 235 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 SLC6A14Q9UN76 642 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 NCKAP1Q9Y2A7 1128 aa16.91■□□□□ 0.3
GNE-204ENST00000539208 TICRRQ7Z2Z1 1910 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 MYO10Q9HD67 2058 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 POM121BA6NF01 834 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 ISM1B1AKI9 464 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 FAM227AF5H4B4 570 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 RFXAPO00287 272 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 MAGEB3O15480 346 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 OR10H3O60404 316 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 CBFA2T3O75081 653 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 KLF8O95600 359 aaPredicted RBP16.9■□□□□ 0.3
GNE-204ENST00000539208 ADORA3P0DMS8 318 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 ALDH4A1P30038 563 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 MPIP34949 423 aa16.9■□□□□ 0.3
GNE-204ENST00000539208 IDUAP35475 653 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms