RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ZNF672Q499Z4 452 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MCMDC2Q4G0Z9 681 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RFTN2Q52LD8 501 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM41BQ5BJD5 291 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ARMCX4Q5H9R4 360 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 LRRC73Q5JTD7 316 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 NDUFAF5Q5TEU4 345 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 IL23RQ5VWK5 629 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CLEC6AQ6EIG7 209 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 WDR74Q6RFH5 385 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 C17orf107Q6ZR85 190 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MOB2Q70IA6 237 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 OTUD6AQ7L8S5 288 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 EFL1Q7Z2Z2 1120 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 NET1Q7Z628 596 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PIGZQ86VD9 579 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CROCCP3Q8IVE0 287 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SLC43A2Q8N370 569 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ACBD4Q8NC06 268 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MAPK1IP1LQ8NDC0 245 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 OR5M9Q8NGP3 310 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 C11orf45Q8TAV5 145 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 LIPHQ8WWY8 451 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 NT5C3BQ969T7 300 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MCHR2Q969V1 340 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 TRIM44Q96DX7 344 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 DTNBP1Q96EV8 351 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CYYR1Q96J86 154 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 LRR1Q96L50 414 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PAPOLGQ9BWT3 736 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 GTPBP2Q9BX10 602 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SELENOIQ9C0D9 397 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RANBP3Q9H6Z4 567 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 TDRD3Q9H7E2 651 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 LRRC40Q9H9A6 602 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 APOBEC3GQ9HC16 384 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF446Q9NWS9 450 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 KLHL28Q9NXS3 571 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CGNQ9P2M7 1197 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 WRAP73Q9P2S5 460 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 DPM3Q9P2X0 92 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SPASTQ9UBP0 616 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF346Q9UL40 294 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CLCA3PQ9Y6N3 262 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 BIVM-ERCC5R4GMW8 1640 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CROCC2H7BZ55 1655 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 COL24A1Q17RW2 1714 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF521Q96K83 1311 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 IGHV3OR16-10A0A075B7F0 116 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 TRBV4-1A0A0J9YWV2 114 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SLC15A5A6NIM6 579 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 HAS3O00219 553 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ARPC2O15144 300 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 EFNA2O43921 213 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RPS6KA5O75582 802 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 NTN1O95631 604 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SNAI1O95863 264 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MBD3O95983 291 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 GPIP06744 558 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 TPSB2P20231 275 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CA4P22748 312 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CPN2P22792 545 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 GLRA1P23415 457 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 IL4RP24394 825 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MAPK3P27361 379 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MAT2AP31153 395 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 POU3F4P49335 361 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 HNMTP50135 292 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PDX1P52945 283 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CDH11P55287 796 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 DSCR9P59020 149 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RPS18P62269 152 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PHEXP78562 749 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 TLE4Q04727 773 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SNTA1Q13424 505 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CDH18Q13634 790 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PDE7AQ13946 482 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 TPSAB1Q15661 275 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 TAF1BQ53T94 588 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 FAM46CQ5VWP2 391 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 LIPJQ5W064 366 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 C9orf57Q5W0N0 161 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 FAHD2BQ6P2I3 314 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 C19orf48Q6RUI8 117 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 Q6ZRP5 223 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 C16orf82Q7Z2V1 217 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SPATA21Q7Z572 469 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CUZD1Q86UP6 607 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SLC22A16Q86VW1 577 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZFAND4Q86XD8 727 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 IQCF2Q8IXL9 164 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 BATF2Q8N1L9 274 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 DCLK2Q8N568 766 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SUMF1Q8NBK3 374 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZBTB44Q8NCP5 570 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF740Q8NDX6 193 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 OR2T11Q8NH01 316 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF671Q8TAW3 534 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 URGCPQ8TCY9 931 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MAPK15Q8TD08 544 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms